miRNEST 2.0, an integrative microRNA resource :: BLAST
>45260_miR819:micropc
Length = 116
Score = 182 bits (92), Expect = 5e-47
Identities = 112/118 (94%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 14 ttataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatat 73
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatata- 59
Query: 74 gtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataa 131
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 60 -tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
Score = 87.7 bits (44), Expect = 2e-18
Identities = 100/118 (84%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 14 ttataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatat 73
|||||||||||||||| || || ||||| ||||| |||||||||||| || ||| ||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 74 gtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataa 131
||| | | |||||||||||| ||||| |||||||||||| ||||||||| ||||||
Sbjct: 56 atgttt--agattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
>45075_miR819:micropc
Length = 116
Score = 182 bits (92), Expect = 5e-47
Identities = 112/118 (94%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 14 ttataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatat 73
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatata- 59
Query: 74 gtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataa 131
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 60 -tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
Score = 87.7 bits (44), Expect = 2e-18
Identities = 100/118 (84%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 14 ttataagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatat 73
|||||||||||||||| || || ||||| ||||| |||||||||||| || ||| ||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 74 gtgtgtctatattcattaacatctatataaatatggataatactagaaagttttataa 131
||| | | |||||||||||| ||||| |||||||||||| ||||||||| ||||||
Sbjct: 56 atgttt--agattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
>44978_miR1130:micropc
Length = 144
Score = 109 bits (55), Expect = 6e-25
Identities = 109/127 (85%)
Strand = Plus / Minus
Query: 17 taagactttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtg 76
|||||||||||||||||| | |||||||||| |||| ||| ||||||||||||||||||
Sbjct: 128 taagactttctagcattacctgtattcatatagatgtcaataaatctaaacatatatgtg 69
Query: 77 tgtctatattcattaacatctatataaatatggataatactagaaagttttataatctga 136
|| || |||||||| ||| ||||||||| |||| ||| ||||||||| ||| | | |||
Sbjct: 68 tgcttagattcattagcatatatataaatgtggacaatgctagaaagtcttacattatga 9
Query: 137 aacggag 143
|||||||
Sbjct: 8 aacggag 2
Score = 71.9 bits (36), Expect = 1e-13
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | ||||||||||||||||| || | ||| ||||||||| |||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaa 60
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
||||| || | || | ||| || ||| ||| |||||||||| |||| | |||| |||||
Sbjct: 61 tctaagcacacatatatgtttagatttattgacatctatatgaatacaggtaatgctaga 120
Query: 121 aagt 124
||||
Sbjct: 121 aagt 124
>45731_miR446:micropc
Length = 86
Score = 91.7 bits (46), Expect = 1e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
Query: 100 at 101
||
Sbjct: 71 at 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| ||| | || | ||| || ||||||||| ||||||
Sbjct: 76 attcatattgatgttaatgaatctagacacacatatatgtttagattcattaaaatctat 17
Query: 100 ataaatatgga 110
|| ||| ||||
Sbjct: 16 atgaatgtgga 6
>46670_miR809:micropc
Length = 97
Score = 87.7 bits (44), Expect = 2e-18
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct: 81 attcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacatctat 22
Score = 48.1 bits (24), Expect = 2e-06
Identities = 73/88 (82%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 27 tagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctatatt 86
||||||| || ||||||| ||| |||||||| |||||| ||| | || | |||||| |||
Sbjct: 4 tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62
Query: 87 cattaacatctatataaatatggataat 114
||||||||| ||||| ||| ||| ||||
Sbjct: 63 cattaacatatatatgaatgtgggtaat 90
>44980_miR808:micropc
Length = 97
Score = 87.7 bits (44), Expect = 2e-18
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct: 81 attcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacatctat 22
Score = 48.1 bits (24), Expect = 2e-06
Identities = 73/88 (82%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 27 tagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtctatatt 86
||||||| || ||||||| ||| |||||||| |||||| ||| | || | |||||| |||
Sbjct: 4 tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62
Query: 87 cattaacatctatataaatatggataat 114
||||||||| ||||| ||| ||| ||||
Sbjct: 63 cattaacatatatatgaatgtgggtaat 90
>46464_miR1132:micropc
Length = 149
Score = 83.8 bits (42), Expect = 3e-17
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 21 actttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtc 80
||||||||||||| ||||||||||| || |||||||||||| ||||||| |||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 81 tatattcattaacatctatataaatatggataatactagaaa 122
|| |||||||||| ||||||||||||||| || | |||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
Score = 77.8 bits (39), Expect = 2e-15
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | || || ||||||||| || | ||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||||||| |||| | || ||| ||||||||| |||||||| |||||| ||| |||||
Sbjct: 86 tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 26 aagtattacattgtgaaacggag 4
>45514_miR1132:micropc
Length = 149
Score = 83.8 bits (42), Expect = 3e-17
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 21 actttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtc 80
||||||||||||| ||||||||||| || |||||||||||| ||||||| |||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 81 tatattcattaacatctatataaatatggataatactagaaa 122
|| |||||||||| ||||||||||||||| || | |||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
Score = 77.8 bits (39), Expect = 2e-15
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | || || ||||||||| || | ||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||||||| |||| | || ||| ||||||||| |||||||| |||||| ||| |||||
Sbjct: 86 tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 26 aagtattacattgtgaaacggag 4
>45099_miR1132:micropc
Length = 149
Score = 83.8 bits (42), Expect = 3e-17
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 21 actttctagcattatcaatattcatatatatgttaatgaatctaaacatatatgtgtgtc 80
||||||||||||| ||||||||||| || |||||||||||| ||||||| |||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 81 tatattcattaacatctatataaatatggataatactagaaa 122
|| |||||||||| ||||||||||||||| || | |||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
Score = 77.8 bits (39), Expect = 2e-15
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 1 cctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaa 60
||||||| ||||| | || || ||||||||| || | ||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87
Query: 61 tctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactaga 120
|||||||| |||| | || ||| ||||||||| |||||||| |||||| ||| |||||
Sbjct: 86 tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27
Query: 121 aagttttataatctgaaacggag 143
|||| ||| | | ||||||||||
Sbjct: 26 aagtattacattgtgaaacggag 4
>45687_miR819:micropc
Length = 84
Score = 73.8 bits (37), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcattatcaatattcatatatatgttaatgaat 61
||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatatatatgttaatgaat 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 84 attcattaacatctatataaatatggataatactagaaagttttataat 132
|||||||||||| ||||| ||| ||| ||| ||||||||| |||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataat 80
>45215_miR1120:micropc
Length = 142
Score = 65.9 bits (33), Expect = 8e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 41 ttcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctata 100
||||| |||||||||||||||||| | |||| | ||||| || |||||||||||||||||
Sbjct: 40 ttcatttatatgttaatgaatctagatatatttatgtgtttaaattcattaacatctata 99
Query: 101 t 101
|
Sbjct: 100 t 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 2 ctccgtatcatattataagactttctagcattatcaatattcatatatatgttaatgaat 61
|||||| ||||| ||||||| |||||| |||| |||| |||||| ||||||||||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatatacatatagatgttaatgaat 83
Query: 62 ctaaacatatatgtgtgtctatattcattaacatctatataaatatggataatactagaa 121
|||||| ||| | | |||| |||||||||||| || || || ||| ||| ||||||
Sbjct: 82 ttaaacacataaatatatctagattcattaacatataaatgaacgtgggcaatgctagaa 23
Query: 122 agtttta 128
|||||||
Sbjct: 22 agtttta 16
>46801_miR809:micropc
Length = 110
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacat 95
|||||||||||||||||||||||| | | |||| ||||||||||||
Sbjct: 73 atgttaatgaatctaaacatatatatctatctagattcattaacat 28
Score = 52.0 bits (26), Expect = 1e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||||||||||||||| | | |||| | ||| || ||||||||||||| ||
Sbjct: 18 attcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatcaat 77
Query: 100 ataaat 105
||||||
Sbjct: 78 ataaat 83
>46637_miR446:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 41 ttcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctata 100
||||||| ||||||||||||||| |||||||| | | ||| ||||||||||||| |||
Sbjct: 8 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 67
Query: 101 taaatatgg 109
| |||||||
Sbjct: 68 tgaatatgg 76
Score = 44.1 bits (22), Expect = 3e-05
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 38 atattcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacat 95
|||||||||| ||||||||||||||| | |||| | |||||| ||||||||||||
Sbjct: 74 atattcatattgatgttaatgaatctagctagatatatatgtctagattcattaacat 17
>44937_miR819:micropc
Length = 94
Score = 58.0 bits (29), Expect = 2e-09
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 9 tcatattataagactttctagcattatcaatatt--catatatatgttaatgaatctaaa 66
|||||||||||||||||||| ||| | ||||| |||||||||||||||| |||| |
Sbjct: 94 tcatattataagactttctattattgcccatatttatatatatatgttaatgagtctata 35
Query: 67 catatatgtgtg 78
||||||||||||
Sbjct: 34 catatatgtgtg 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 97 tatataaatatggataatactagaaagttttataat 132
||||||||||||| |||| |||||||| |||||||
Sbjct: 55 tatataaatatgggcaataatagaaagtcttataat 90
>46833_miR446:micropc
Length = 81
Score = 54.0 bits (27), Expect = 3e-08
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| |||||||||||| || | | |||||| |||||| ||||||||||||| ||
Sbjct: 71 attcatattgatgttaatgaatttagatagatatgtatgtctagattcattaacatcaat 12
Query: 100 ata 102
|||
Sbjct: 11 ata 9
Score = 50.1 bits (25), Expect = 5e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatgg 109
||||||||||||||| ||||| || | | |||| ||||||||||||| |||| ||| |||
Sbjct: 16 atgttaatgaatctagacatacatatctatctaaattcattaacatcaatatgaatgtgg 75
Query: 110 a 110
|
Sbjct: 76 a 76
>46060_miR809:micropc
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 ttctagcattatcaatattcatatatatgttaatgaatcta 64
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 2 ttctagcattttccatattcatattgatgttaatgaatcta 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 78 gtctatattcattaacatctatataaatatggataatactagaa 121
||||| ||||||||||||| |||| |||||||| ||| ||||||
Sbjct: 45 gtctagattcattaacatcaatatgaatatggaaaatgctagaa 2
>46318_miR446:micropc
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 38 atattcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatct 97
|||||||||| | |||||| |||||| |||||||| | | | || |||||||||||||
Sbjct: 78 atattcatattgacgttaataaatctagacatatatatctatatagattcattaacatca 19
Query: 98 atataaatatgg 109
|||||||||||
Sbjct: 18 ttataaatatgg 7
>45708_miR809:micropc
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 38 atattcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatct 97
|||||||||| || |||||||||||| | | |||| | |||||| |||||||| ||||
Sbjct: 16 atattcatattgatattaatgaatctagatagatatatatgtctagattcattagcatca 75
Query: 98 atataaat 105
||||||||
Sbjct: 76 atataaat 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 54 taatgaatctaaacatatatgtgtgtctatattcattaacatctatataaatatg 108
||||||||||| |||||||| | | |||| ||||||||| ||| |||| ||||||
Sbjct: 69 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatatg 15
>46336_miR809:micropc
Length = 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 68/82 (82%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||| |||||||||||| ||||||| | | | || |||||| || ||| ||
Sbjct: 81 attcatatttatattaatgaatctagacatata--tctatttaaattcatcaatatcaat 24
Query: 100 ataaatatggataatactagaa 121
|||||||||| ||||||||||
Sbjct: 23 ataaatatggtgaatactagaa 2
>45839_miR809:micropc
Length = 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 68/82 (82%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatctat 99
|||||||| ||| |||||||||||| ||||||| | | | || |||||| || ||| ||
Sbjct: 81 attcatatttatattaatgaatctagacatata--tctatttaaattcatcaatatcaat 24
Query: 100 ataaatatggataatactagaa 121
|||||||||| ||||||||||
Sbjct: 23 ataaatatggtgaatactagaa 2
>45522_miR809:micropc
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 50 atgttaatgaatctaaacatatatgtgtgtctatattcattaacatc 96
||||||||||||||| |||||| | | | |||| |||||||||||||
Sbjct: 28 atgttaatgaatctagacatatgtatctatctagattcattaacatc 74
>46775_miR808:micropc
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 40 attcatatatatgttaatgaatctaaacatatatgtgtgtctatattcattaacatc 96
|||||||| ||||||||||||||||| |||||| | | |||| ||| |||||||||
Sbjct: 82 attcatattgatgttaatgaatctaaa-atatatatctatctagatttattaacatc 27
