miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;EU548871.1/183-293 3702:Arabidopsis thaliana (thale
cress)
Length = 111
Score = 172 bits (87), Expect = 6e-43
Identities = 105/111 (94%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggtcatgaagaagatcattagattgattcatctt 61
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 1 gttgagaggaatattgtctggctcgaggtcatgaagaagatcggtagattgattcatttt 60
Query: 62 aaagaatgaaaaccctaaatgattctcggaccaggcttcattccccccaac 112
||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagagtgaaatccctaaatgattctcggaccaggcttcattccccccaac 111
>RF00075;mir-166;ABIM01027778.1/13122-13246 3649:Carica papaya
(papaya)
Length = 125
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 75 cctaaatgattctcggaccaggcttcattcccccca 110
||||||||||||||||||||||||||||||||||||
Sbjct: 88 cctaaatgattctcggaccaggcttcattcccccca 123
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggtcatg 34
|||||||||||||||||||||||||||||||||
Sbjct: 1 gttgagaggaatgttgtctggctcgaggtcatg 33
>RF00075;mir-166;AC189313.2/128870-128784 51351:Brassica rapa subsp.
pekinensis
Length = 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 75 cctaaatgattctcggaccaggcttcattcccccca 110
||||||||||||||||||||||||||||||||||||
Sbjct: 50 cctaaatgattctcggaccaggcttcattcccccca 85
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 4 tgagaggaatgttgtctggctcgaggtcatgaagaa 39
|||||||| |||||||||||||||||||||||||||
Sbjct: 3 tgagaggactgttgtctggctcgaggtcatgaagaa 38
>RF00075;mir-166;AL590346.1/40100-40217 3702:Arabidopsis thaliana
(thale cress)
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggtcatgaagaaga 41
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gttgagaggattgttgtctggctcgaggtcatgaagaaga 40
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 69 gaaaaccctaaatgattctcggaccaggcttcattccccc 108
|||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 gaaaaccctagatgattctcggaccaggcttcattccccc 114
>RF00075;mir-166;EU548914.1/298-397 3702:Arabidopsis thaliana (thale
cress)
Length = 100
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 70 aaaaccctaaatgattctcggaccaggcttcattccccccaac 112
||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 58 aaaactctaaatgattctcggaccaggcttcattcccctcaac 100
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 agaggaatgttgtctggctcgaggtcatg 34
||||||||||||| |||||||||||||||
Sbjct: 5 agaggaatgttgtttggctcgaggtcatg 33
>RF00075;mir-166;AARH01003279.1/141842-141699 3694:Populus
trichocarpa
Length = 144
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggtcat 33
||||||||||||||||||||||||||||||||
Sbjct: 1 gttgagaggaatgttgtctggctcgaggtcat 32
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 80 atgattctcggaccaggcttcattcc 105
||||||||||||||||||||||||||
Sbjct: 112 atgattctcggaccaggcttcattcc 137
>RF00075;mir-166;AC144592.26/52711-52605 3880:Medicago truncatula
(barrel medic)
Length = 107
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 83 attctcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||||||
Sbjct: 78 attctcggaccaggcttcattccccccaa 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AM464541.1/10325-10481 29760:Vitis vinifera
Length = 157
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggt 30
|||||||||||||||||||||||||||||
Sbjct: 1 gttgagaggaatgttgtctggctcgaggt 29
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 81 tgattctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||| ||||
Sbjct: 126 tgattctcggaccaggcttcattcccctcaac 157
>RF00075;mir-166;AARH01003608.1/24010-23917 3694:Populus trichocarpa
Length = 94
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattccccccaac 94
>RF00075;mir-166;AARH01004299.1/36070-36161 3694:Populus trichocarpa
Length = 92
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||||
Sbjct: 65 tctcggaccaggcttcattccccccaac 92
>RF00075;mir-166;AASG02003618.1/9737-9830 3988:Ricinus communis
(castor bean)
Length = 94
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattccccccaac 94
>RF00075;mir-166;AM448542.2/4591-4502 29760:Vitis vinifera
Length = 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||||
Sbjct: 63 tctcggaccaggcttcattccccccaac 90
>RF00075;mir-166;AY664413.1/238586-238494 4577:Zea mays
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||||
Sbjct: 66 tctcggaccaggcttcattccccccaac 93
>RF00075;mir-166;AC216447.1/33715-33853 3694:Populus trichocarpa
Length = 139
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 75 cctaaatgattctcggaccaggcttcattcc 105
|||||||||||||||||||||||| ||||||
Sbjct: 102 cctaaatgattctcggaccaggctccattcc 132
>RF00075;mir-166;AP009261.1/72240-72093 4081:Solanum lycopersicum
Length = 148
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggtca 32
|||||| ||||||||||||||||||||||||
Sbjct: 1 gttgaggggaatgttgtctggctcgaggtca 31
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 123 tcggaccaggcttcattccccccaa 147
>RF00075;mir-166;ABXC01006910.1/39676-39486 4558:Sorghum bicolor
(sorghum)
Length = 191
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||||
Sbjct: 164 tctcggaccaggcttcattccccccaa 190
>RF00075;mir-166;AK251614.1/146-305 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 160
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||||
Sbjct: 133 tctcggaccaggcttcattccccccaa 159
>RF00075;mir-166;AAAA02020902.1/104196-104017 39946:Oryza sativa
Indica Group
Length = 180
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||||
Sbjct: 153 tctcggaccaggcttcattccccccaa 179
>RF00075;mir-166;AP003614.2/6887-6709 39947:Oryza sativa Japonica
Group
Length = 179
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||||
Sbjct: 152 tctcggaccaggcttcattccccccaa 178
>RF00075;mir-166;ABIM01012128.1/12128-12036 3649:Carica papaya
(papaya)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattccccccaac 93
>RF00075;mir-166;AARH01001058.1/130278-130374 3694:Populus
trichocarpa
Length = 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattccccccaac 97
>RF00075;mir-166;AARH01000156.1/300448-300294 3694:Populus
trichocarpa
Length = 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgaggtca 32
||||| ||||||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgaggtca 31
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 130 tcggaccaggcttcattccccccaa 154
>RF00075;mir-166;AASG02002547.1/1046-1166 3988:Ricinus communis
(castor bean)
Length = 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgaggtca 32
||||| ||||||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgaggtca 31
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattccccccaa 120
>RF00075;mir-166;AASG02007713.1/11405-11313 3988:Ricinus communis
(castor bean)
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattccccccaac 93
>RF00075;mir-166;AC140029.19/70482-70585 3880:Medicago truncatula
(barrel medic)
Length = 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccccca 110
||||||||||||||||||||||||||
Sbjct: 77 tctcggaccaggcttcattcccccca 102
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggctcgaggt 30
||||||||||| |||||||||||||||||
Sbjct: 1 gttgagaggaacgttgtctggctcgaggt 29
>RF00075;mir-166;FJ010939.2/353-450 52838:Musa balbisiana
Length = 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 ggaatgttgtctggctcgaggtcatg 34
||||||||||||||||||||||||||
Sbjct: 8 ggaatgttgtctggctcgaggtcatg 33
>RF00075;mir-166;AY501431.1/1-212 4577:Zea mays
Length = 212
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccccca 110
||||||||||||||||||||||||||
Sbjct: 187 tctcggaccaggcttcattcccccca 212
>RF00075;mir-166;ABXC01000715.1/152379-152276 4558:Sorghum bicolor
(sorghum)
Length = 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||
Sbjct: 79 tcggaccaggcttcattccccccaac 104
>RF00075;mir-166;AAAA02007901.1/15784-15895 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||||||||
Sbjct: 87 tcggaccaggcttcattccccccaac 112
>RF00075;mir-166;ABIM01020443.1/6232-6097 3649:Carica papaya
(papaya)
Length = 136
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 111 tcggaccaggcttcattccccccaa 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;EU548832.1/235-380 3702:Arabidopsis thaliana (thale
cress)
Length = 146
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattccccccaa 145
>RF00075;mir-166;EU548853.1/145-266 3702:Arabidopsis thaliana (thale
cress)
Length = 122
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 97 tcggaccaggcttcattccccccaa 121
>RF00075;mir-166;AARH01006070.1/215270-215403 3694:Populus
trichocarpa
Length = 134
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 109 tcggaccaggcttcattccccccaa 133
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AARH01001165.1/83261-83385 3694:Populus trichocarpa
Length = 125
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattccccccaa 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AASG02010073.1/7999-8131 3988:Ricinus communis
(castor bean)
Length = 133
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattccccccaa 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;BABK01006649.1/1239-1127 34305:Lotus japonicus
Length = 113
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 88 tcggaccaggcttcattccccccaa 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AY599420.1/1-185 4096:Nicotiana sylvestris (wood
tobacco)
Length = 185
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tgagaggaatgttgtctggctcgaggtca 32
|||| ||||||||||||||||||||||||
Sbjct: 1 tgaggggaatgttgtctggctcgaggtca 29
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattcccccca 110
||||||||||||||||||||||||
Sbjct: 162 tcggaccaggcttcattcccccca 185
>RF00075;mir-166;AM468140.2/16750-16595 29760:Vitis vinifera
Length = 156
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 131 tcggaccaggcttcattccccccaa 155
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;CAAP02000145.1/77043-77192 29760:Vitis vinifera
Length = 150
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaa 111
|||||||||||||||||||||||||
Sbjct: 125 tcggaccaggcttcattccccccaa 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgagg 29
||||| |||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;ABIM01012777.1/4514-4390 3649:Carica papaya
(papaya)
Length = 125
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||| ||||
Sbjct: 98 tctcggaccaggcttcattcccctcaac 125
>RF00075;mir-166;AC148487.14/34671-34762 3880:Medicago truncatula
(barrel medic)
Length = 92
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccc 108
||||||||||||||||||||||||
Sbjct: 65 tctcggaccaggcttcattccccc 88
>RF00075;mir-166;CT009488.4/103389-103285 3880:Medicago truncatula
(barrel medic)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 attctcggaccaggcttcattcccccca 110
||||||||||||||||||||||| ||||
Sbjct: 76 attctcggaccaggcttcattcctccca 103
>RF00075;mir-166;AC226041.1/11826-11708 4641:Musa acuminata
Length = 119
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||| ||||
Sbjct: 92 tctcggaccaggcttcattcccctcaac 119
>RF00075;mir-166;AY664417.1/307265-307178 4577:Zea mays
Length = 88
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||||
Sbjct: 61 tctcggaccaggcttcattcctcccaac 88
>RF00075;mir-166;EU956093.1/113-209 4577:Zea mays
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgaggt 30
||||| ||||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgaggt 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccc 92
>RF00075;mir-166;ABXC01000331.1/255164-255261 4558:Sorghum bicolor
(sorghum)
Length = 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||| ||||
Sbjct: 71 tctcggaccaggcttcattcccctcaac 98
>RF00075;mir-166;ABXC01002952.1/108749-108653 4558:Sorghum bicolor
(sorghum)
Length = 97
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgaggt 30
||||| ||||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgaggt 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccc 92
>RF00075;mir-166;AC027660.2/136704-136618 39947:Oryza sativa
Japonica Group
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||| ||||
Sbjct: 60 tctcggaccaggcttcattcccctcaac 87
>RF00075;mir-166;AAAA02029560.1/62131-62045 39946:Oryza sativa
Indica Group
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccccccaac 112
||||||||||||||||||||||| ||||
Sbjct: 60 tctcggaccaggcttcattcccctcaac 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 gttgagaggaatgttgtctggc 23
||||||||||||||||||||||
Sbjct: 1 gttgagaggaatgttgtctggc 22
>RF00075;mir-166;AP008208.1/26148565-26148667 39947:Oryza sativa
Japonica Group
Length = 103
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 ttgagaggaatgttgtctggctcgaggt 30
||||| ||||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgaggt 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 76 tctcggaccaggcttcattcccc 98
>RF00075;mir-166;EU548781.1/288-178 3702:Arabidopsis thaliana (thale
cress)
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattccccccaac 112
||||||||||||||||| |||||||||
Sbjct: 85 ctcggaccaggcttcatcccccccaac 111
>RF00075;mir-166;AARH01009662.1/134102-134198 3694:Populus
trichocarpa
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccc 92
>RF00075;mir-166;BABK01008352.1/1692-1590 34305:Lotus japonicus
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 ttctcggaccaggcttcattccc 106
|||||||||||||||||||||||
Sbjct: 75 ttctcggaccaggcttcattccc 97
>RF00075;mir-166;BABK01014008.1/1327-1223 34305:Lotus japonicus
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 tgagaggaatgttgtctggctcgaggt 30
||||||||| |||||||||||||||||
Sbjct: 3 tgagaggaacgttgtctggctcgaggt 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattccccc 108
|||||||||||||||||||||||
Sbjct: 79 ctcggaccaggcttcattccccc 101
>RF00075;mir-166;EU945393.1/89-202 4577:Zea mays
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 87 tctcggaccaggcttcattcccc 109
>RF00075;mir-166;AY501432.1/1-122 4577:Zea mays
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcccc 119
>RF00075;mir-166;ABXC01000193.1/181030-180913 4558:Sorghum bicolor
(sorghum)
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 91 tctcggaccaggcttcattcccc 113
>RF00075;mir-166;AAAA02030332.1/11899-12019 39946:Oryza sativa
Indica Group
Length = 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattcccc 107
|||||||||||||||||||||||
Sbjct: 94 tctcggaccaggcttcattcccc 116
>RF00075;mir-166;ABIM01018276.1/2199-2062 3649:Carica papaya
(papaya)
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 tctcggaccaggcttcattccc 106
||||||||||||||||||||||
Sbjct: 111 tctcggaccaggcttcattccc 132
>RF00075;mir-166;AC189591.2/50508-50400 51351:Brassica rapa subsp.
pekinensis
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||
Sbjct: 84 tcggaccaggcttcattcccctcaac 109
>RF00075;mir-166;EU548911.1/166-263 3702:Arabidopsis thaliana (thale
cress)
Length = 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||
Sbjct: 73 tcggaccaggcttcattcccctcaac 98
>RF00075;mir-166;EU548905.1/187-287 3702:Arabidopsis thaliana (thale
cress)
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||
Sbjct: 76 tcggaccaggcttcattcccctcaac 101
>RF00075;mir-166;AARH01006305.1/50528-50441 3694:Populus trichocarpa
Length = 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattcccc 107
||||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattcccc 83
>RF00075;mir-166;AC216447.1/33512-33607 3694:Populus trichocarpa
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||
Sbjct: 71 tcggaccaggcttcattcccctcaac 96
>RF00075;mir-166;AC209184.1/141607-141700 3694:Populus trichocarpa
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattcccc 107
||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccc 89
>RF00075;mir-166;AASG02003407.1/927-777 3988:Ricinus communis
(castor bean)
Length = 151
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattcccc 107
||||||||||||||||||||||
Sbjct: 125 ctcggaccaggcttcattcccc 146
>RF00075;mir-166;CAAP02000553.1/130979-130890 29760:Vitis vinifera
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||
Sbjct: 65 tcggaccaggcttcattcccctcaac 90
>RF00075;mir-166;CAAP02000526.1/74430-74281 29760:Vitis vinifera
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattcccc 107
||||||||||||||||||||||
Sbjct: 124 ctcggaccaggcttcattcccc 145
>RF00075;mir-166;CAAP02001545.1/66166-66077 29760:Vitis vinifera
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
||||||||||||||||||||| ||||
Sbjct: 65 tcggaccaggcttcattcccctcaac 90
>RF00075;mir-166;ABXC01000758.1/126828-126715 4558:Sorghum bicolor
(sorghum)
Length = 114
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattcccc 107
||||||||||||||||||||||
Sbjct: 88 ctcggaccaggcttcattcccc 109
>RF00075;mir-166;AJ872261.1/164-57 311981:Festuca glaucescens x
Lolium multiflorum
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcattccccccaac 112
|||||||||||||||| |||||||||
Sbjct: 83 tcggaccaggcttcatcccccccaac 108
>RF00075;mir-166;ABEU01001509.1/37358-37431 145481:Physcomitrella
patens subsp. patens
Length = 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcattcccc 107
||||||||||||||||||||||
Sbjct: 48 ctcggaccaggcttcattcccc 69
