miRNEST 2.0, an integrative microRNA resource :: BLAST
>40108_ath-MIR408:mirbase
Length = 218
Score = 212 bits (107), Expect = 8e-56
Identities = 136/145 (93%), Gaps = 8/145 (5%)
Strand = Plus / Plus
Query: 2 aaggttagattggtattgcaatgaaagaagt------ggtaatgatagagagagacaggg 55
|||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 1 aaggttagattggtattgcaatgaaagaagacaaagcggtaatga--gagagagacaggg 58
Query: 56 aacaagcagagcatggattgagtttactaaaacattaaacgactctgttttgtctctacc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aacaagcagagcatggattgagtttactaaaacattaaacgactctgttttgtctctacc 118
Query: 116 catgcactgcctcttccctggctcc 140
|||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctcc 143
>41463_ptc-MIR408:mirbase
Length = 105
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 101 tgttttgtctctacccatgcactgcctcttccctggct 138
||||||| ||||||||||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggct 97
>41683_vvi-MIR408:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 100 ctgttttgtctctacccatgcactgcctcttccctggctc 139
||||||| |||||||||||||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggctc 99
>40391_rco-MIR408:mirbase
Length = 92
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 99 tctgttttgtctctacccatgcactgcctcttccctggct 138
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 49 tctgttttggctctacccctgcactgcctcttccctggct 88
>41252_csi-MIR408:mirbase
Length = 153
Score = 60.0 bits (30), Expect = 7e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 98 ctctgttttgtctctacccatgcactgcctcttccctggctc 139
|||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 101 ctctgttttggctcctcccatgcactgcctcttccctggctc 142
>42465_sof-MIR408d:mirbase
Length = 215
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 113 acccatgcactgcctcttccctggctcc 140
|||| |||||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggctcc 199
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 115 ccatgcactgcctcttccctggct 138
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>40405_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 catgcactgcctcttccctggctc 139
||||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggctc 103
>40404_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 116 catgcactgcctcttccctggctc 139
||||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggctc 103
>42829_zma-MIR408:mirbase
Length = 191
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctcc 140
|||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctcc 175
>42647_tae-MIR408:mirbase
Length = 187
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctcc 140
|||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctcc 159
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 acccatgcactgcctcttccctggctc 139
|||| ||||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggctc 180
>42464_sof-MIR408c:mirbase
Length = 286
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctcc 140
|||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctcc 270
>42463_sof-MIR408b:mirbase
Length = 286
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctcc 140
|||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctcc 270
>42462_sof-MIR408a:mirbase
Length = 283
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctcc 140
|||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctcc 267
>42052_osa-MIR408:mirbase
Length = 213
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctcc 140
|||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctcc 176
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 116 catgcactgcctcttccctggct 138
|||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggct 114
>39428_pta-MIR408:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 atgcactgcctcttccctggctc 139
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>42830_zma-MIR408b:mirbase
Length = 147
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctc 139
||||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggctc 147
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggctc 139
||||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggctc 248
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 atgcactgcctcttccctggct 138
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgcactgcctcttccctggct 138
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
