miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008210.1/21918444-21918599 39947:Oryza sativa
Japonica Group
Length = 156
Score = 107 bits (54), Expect = 3e-23
Identities = 86/96 (89%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 13 gaccgaatgtgacatattctagtactacgaatctgggc---tgtatgtctagattcatag 69
||||| || ||||||||||||||| ||||||||||| | ||||| |||||||||||||
Sbjct: 37 gaccggatatgacatattctagtattacgaatctggacatatgtatatctagattcatag 96
Query: 70 tactaggatgtgtcacatctggtactaggttggttt 105
|||||| |||||||||||||| ||||||||||||||
Sbjct: 97 tactagtatgtgtcacatctgatactaggttggttt 132
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 103 bits (52), Expect = 4e-22
Identities = 81/90 (90%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgggc---tgtatgtctagattcatagtactag 75
|||||||||| |||||||| | |||||||| | |||||||| ||||||||| ||||||
Sbjct: 43 atgtgacataatctagtacgatgaatctggacatatgtatgtccagattcataatactag 102
Query: 76 gatgtgtcacatctggtactaggttggttt 105
||||||||||||||||||||||||||||||
Sbjct: 103 gatgtgtcacatctggtactaggttggttt 132
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 95.6 bits (48), Expect = 1e-19
Identities = 80/90 (88%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgggc---tgtatgtctagattcatagtactag 75
|||||||||| |||||||| | |||||||| | |||||||| ||||||||| ||||||
Sbjct: 114 atgtgacataatctagtacgatgaatctggacatatgtatgtccagattcataatactag 55
Query: 76 gatgtgtcacatctggtactaggttggttt 105
|||||||||||||||||||||| |||||||
Sbjct: 54 gatgtgtcacatctggtactagattggttt 25
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 87.7 bits (44), Expect = 3e-17
Identities = 79/90 (87%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgggctg---tatgtctagattcatagtactag 75
|||||||| |||||||||| |||||||||| | | |||||| |||||| |||||||||
Sbjct: 43 atgtgacacattctagtacaacgaatctggacagaggtatgtccagattcgtagtactag 102
Query: 76 gatgtgtcacatctggtactaggttggttt 105
||||||||||||| |||||||||||||||
Sbjct: 103 gatgtgtcacatccagtactaggttggttt 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| || ||||||||||||||||||
Sbjct: 114 atgtgacacatcctagtactacgaatctgg 85
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 85.7 bits (43), Expect = 1e-16
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 14 accgaatgtgacatattctagtactacgaatctggg----ctgtatgtctagattcatag 69
|||| ||||||||||||||||||||| |||||||| | |||||| ||||||||||
Sbjct: 38 accgtatgtgacatattctagtactatgaatctggatatacattatgtccagattcatag 97
Query: 70 tactaggatgtgtcacatctggtactaggttggttt 105
||||||||| | |||||||| |||||||||||||||
Sbjct: 98 tactaggatatttcacatctagtactaggttggttt 133
Score = 52.0 bits (26), Expect = 1e-06
Identities = 69/83 (83%), Gaps = 4/83 (4%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgggc----tgtatgtctagattcatagtacta 74
|||||| |||| ||||||||| |||||||| | ||||| || |||||||||||||||
Sbjct: 115 atgtgaaatatcctagtactatgaatctggacataatgtatatccagattcatagtacta 56
Query: 75 ggatgtgtcacatctggtactag 97
| || |||||||| ||||||||
Sbjct: 55 gaatatgtcacatacggtactag 33
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 48 tgtctagattcgtagtactaggatgtgtcacatccggtactaggttggttt 98
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 77.8 bits (39), Expect = 3e-14
Identities = 83/97 (85%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 12 ggaccgaatgtgacatattctagtactacgaatctgggc---tgtatgtctagattcata 68
|||||| ||||||||||||||||||| | |||| ||| | |||||| |||||| ||
Sbjct: 35 ggaccggatgtgacatattctagtacgatgaatttggatatatatatgtccagattcgta 94
Query: 69 gtactaggatgtgtcacatctggtactaggttggttt 105
|||||||||||||||||||| | ||||||||||||||
Sbjct: 95 gtactaggatgtgtcacatccgatactaggttggttt 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| || ||||||||||||||||||
Sbjct: 113 atgtgacacatcctagtactacgaatctgg 84
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 51 tgtatgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||||| |||||||||||||||| |||||||||||| |||| |||||||||||
Sbjct: 77 tgtatgtccagattcatagtactagaatgtgtcacatccggtattaggttggttt 131
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 14 accgaatgtgacatattctagtactacgaatctgg 48
|||| |||||||| |||||||||||| ||||||||
Sbjct: 118 accggatgtgacacattctagtactatgaatctgg 84
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||| ||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 40 tatgtccagattcatagtactaaaatgtgtcacatccggtactaggttggttt 92
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 73.8 bits (37), Expect = 4e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||| |||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 66 tatgtccagattcgtagtaataggatgtgtcacatccggtactaggttggttt 118
>RF00906;MIR1122;AAAA02003006.1/3399-3554 39946:Oryza sativa Indica
Group
Length = 156
Score = 67.9 bits (34), Expect = 2e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 52 gtatgtctagattcatagtactaggatgtgtcacatctggtactaggttg 101
||||||||||||| |||| ||| ||||||||||||||||||||||||||
Sbjct: 78 gtatgtctagatttgtagttctaagatgtgtcacatctggtactaggttg 29
Score = 67.9 bits (34), Expect = 2e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 87 agattcgtagtattaggatgtgtcacatccggtactaggttggttt 132
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 52 gtatgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||||||| ||||||||||||||||||||
Sbjct: 78 gtatgtctagattcattgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AACV01014928.1/15280-15408 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 12 ggaccgaatgtgacatattctagtactacgaatctgg 48
|||||| ||||||||||||||||||||||||||||||
Sbjct: 35 ggaccggatgtgacatattctagtactacgaatctgg 71
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 63.9 bits (32), Expect = 4e-10
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgggc---tgtatgtctagattcatagtactag 75
||||||||||||||||||| | |||||||| | |||||| |||||| |||||||||
Sbjct: 43 atgtgacatattctagtacgatgaatctggacagatgtatgctcagattcgtagtactag 102
Query: 76 gatgtgtcacatctggtactag 97
|||||||| ||||||||||||
Sbjct: 103 aatgtgtcatatctggtactag 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tgacatattctagtactacgaatctg 47
||||| ||||||||||||||||||||
Sbjct: 111 tgacacattctagtactacgaatctg 86
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 63.9 bits (32), Expect = 4e-10
Identities = 54/61 (88%), Gaps = 4/61 (6%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg----gctgtatgtctagattcatagtacta 74
||||||| |||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 43 atgtgacgtattctagtactacgaatctggacaaggagtatgtctagattcatagtacta 102
Query: 75 g 75
|
Sbjct: 103 g 103
>RF00906;MIR1122;AAAA02027326.1/570-454 39946:Oryza sativa Indica
Group
Length = 117
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 67 tagtactaggatgtgtcacatctggtactaggttggttt 105
|||||||||||||||||||||| |||||||||||||||
Sbjct: 55 tagtactaggatgtgtcacatccagtactaggttggttt 93
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactag 97
||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct: 75 tgtctagattcgtagtactaggatgtgtcacatccggtcctag 33
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 ggaccgaatgtgacatattctagtactacgaatct 46
|||||| |||||||| || ||||||||||||||||
Sbjct: 36 ggaccggatgtgacacatcctagtactacgaatct 70
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 54 atgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||| ||||||||||||||||||||||
Sbjct: 76 atgtctagattcttagtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||| |||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct: 62 tgtccagattcgtagtactaggatatgtcacatccagtactaggttggttt 112
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||| ||||||||||||||||||
Sbjct: 94 atgtgacatatcctagtactacgaatctgg 65
>RF00906;MIR1122;AAAA02018547.1/31962-31829 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 6e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||||||||||||||| |||||||||
Sbjct: 60 tgtctagattcatagtactaggatatgtcacatc 93
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 60.0 bits (30), Expect = 6e-09
Identities = 72/84 (85%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 22 tgacatattctagtactacgaatctgggctg---tatgtctagattcatagtactaggat 78
||||| || |||||||||||||||||| | | |||||| |||||||||||||||||||
Sbjct: 112 tgacacatcctagtactacgaatctggacagatatatgtccagattcatagtactaggat 53
Query: 79 gtgtcaca-tctggtactaggttg 101
||||| | || ||||||||||||
Sbjct: 52 atgtcaaagtcaggtactaggttg 29
Score = 56.0 bits (28), Expect = 9e-08
Identities = 76/91 (83%), Gaps = 7/91 (7%)
Strand = Plus / Plus
Query: 22 tgacatattctagtactacgaatctgggc---tgtatgtctagattcatagtactaggat 78
|||||||| ||||||||| |||||||| | | | |||| |||||| ||||||||||||
Sbjct: 47 tgacatatcctagtactatgaatctggacatatatctgtccagattcgtagtactaggat 106
Query: 79 gtgtca----catctggtactaggttggttt 105
|||||| |||| ||||||||||||||||
Sbjct: 107 gtgtcaacatcatcaggtactaggttggttt 137
>RF00906;MIR1122;ABRL01002011.1/9416-9570 65489:Oryza barthii
Length = 155
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||||||||||||||||||||||
Sbjct: 43 atgtgacatattctagtactacgaatctgg 72
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 60.0 bits (30), Expect = 6e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 48 ggctgtatgtctagattcatagtactaggatgtgtcacatct 89
|||| ||||||||||||||| ||||||| |||||||||||||
Sbjct: 76 ggctttatgtctagattcattgtactagaatgtgtcacatct 117
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 56 gtctagattcatagtactaggatgtgtcacatc 88
|||||||||||| ||||||||||||||||||||
Sbjct: 41 gtctagattcatcgtactaggatgtgtcacatc 73
>RF00906;MIR1122;AAAA02021292.1/4370-4241 39946:Oryza sativa
Indica Group
Length = 130
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||||||||||||||||||||||||||
Sbjct: 61 agattcatagtactaggatgtgtcacatc 89
>RF00906;MIR1122;AAAA02020879.1/5788-5634 39946:Oryza sativa Indica
Group
Length = 155
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||| |||||||||||| ||| |||||||||| || ||||||||||||||
Sbjct: 79 tatgtccagattcatagtattagaatgtgtcacaactattactaggttggttt 131
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatctggtactaggttg 101
|||||| |||||| |||| ||||||||||||||||| ||||| ||||||
Sbjct: 80 tatgtccagattcgtagtcctaggatgtgtcacatccggtacgaggttg 128
>RF00906;MIR1122;AP005098.4/61806-61935 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||||||||||||||||||||||||||
Sbjct: 70 agattcatagtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 58.0 bits (29), Expect = 2e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||| |||||| | ||| ||||||||||||||||| || ||||||||||||
Sbjct: 56 tatgtccagattcgttgtaataggatgtgtcacatctagtcctaggttggttt 108
>RF00906;MIR1122;AAAA02005552.1/15961-15806 39946:Oryza sativa
Indica Group
Length = 156
Score = 56.0 bits (28), Expect = 9e-08
Identities = 72/86 (83%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 23 gacatattctagtactacgaatctgggc---tgtatgtctagattcatagtactaggatg 79
||||||||||| ||||| ||||||| | ||||||| ||||||| |||| |||||||
Sbjct: 47 gacatattctaatactataaatctggacaaatgtatgttcagattcacagtattaggatg 106
Query: 80 tgtcacatctggtactaggttggttt 105
||||||||| | || |||||||||||
Sbjct: 107 tgtcacatccgataataggttggttt 132
>RF00906;MIR1122;AAAA02028867.1/14372-14216 39946:Oryza sativa
Indica Group
Length = 157
Score = 56.0 bits (28), Expect = 9e-08
Identities = 77/93 (82%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 13 gaccgaatgtgacatattctagtactacgaatctgg----gctgtatgtctagattcata 68
||||||||| ||| ||| |||||||||||||||||| || ||||||||||||||
Sbjct: 37 gaccgaatgggacgtatcctagtactacgaatctggacatgccccctgtctagattcata 96
Query: 69 gtactaggatgtgtcacatctggtactaggttg 101
|||||||||| |||| ||| ||| ||||||||
Sbjct: 97 gtactaggatatgtccaatccggtcctaggttg 129
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 56.0 bits (28), Expect = 9e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 54 atgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||||||||| | ||||||||||||||||||| || ||||||||||||
Sbjct: 80 atgtctagattcgttttactaggatgtgtcacatccagtcctaggttggttt 131
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 56.0 bits (28), Expect = 9e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatc 88
|||||| |||||||| ||||||||||||||||||||
Sbjct: 68 tatgtccagattcattgtactaggatgtgtcacatc 103
>RF00906;MIR1122;AC231808.2/23061-22936 63629:Oryza minuta
Length = 126
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 57 tctagattcatagtactaggatgtgtcacat 87
|||||||||||||||||||||| ||||||||
Sbjct: 54 tctagattcatagtactaggatatgtcacat 84
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 12 ggaccgaatgtgacatattctagtactacgaatct 46
|||| ||||||||||||| ||||||||| ||||||
Sbjct: 91 ggactgaatgtgacatatcctagtactatgaatct 57
>RF00906;MIR1122;AAAA02031042.1/16213-16344 39946:Oryza sativa
Indica Group
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 53 tatgtctagattcatagtactaggatgtgtcacat 87
|||||||||||| || |||||||||||||||||||
Sbjct: 77 tatgtctagatttattgtactaggatgtgtcacat 43
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtg 81
|||||||||||||||||||||||||||
Sbjct: 75 tgtctagattcatagtactaggatgtg 49
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa
Japonica Group
Length = 121
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 12 ggaccgaatgtgacatattctagtactacgaatct 46
|||||| ||||||||| ||||||||||||||||||
Sbjct: 86 ggaccggatgtgacattttctagtactacgaatct 52
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 54 atgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||| ||||||||||||||||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 62/73 (84%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgggctgta---tgtctagattcatagtactag 75
|||||||| || ||||||| |||||||||| | ||| |||| |||||| | |||||||
Sbjct: 43 atgtgacacatcctagtacaacgaatctggacagtaatttgtccagattcgttgtactag 102
Query: 76 gatgtgtcacatc 88
|||||||||||||
Sbjct: 103 gatgtgtcacatc 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||| | ||||||||||||||||||||
Sbjct: 75 tgtccagattcgttgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 54 atgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||| ||||||||||||||||| ||||
Sbjct: 82 atgtctagattcgtagtactaggatgtgtcccatc 116
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtg 81
|||||||||||||||||||||||||||
Sbjct: 75 tgtctagattcatagtactaggatgtg 49
>RF00906;MIR1122;AC128646.5/47101-47248 39947:Oryza sativa Japonica
Group
Length = 148
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttg 101
|||||||||| || ||||||| |||||||||||| |||||||||||
Sbjct: 74 tgtctagatttattgtactagaatgtgtcacatccagtactaggttg 120
>RF00906;MIR1122;AP006461.3/116161-116316 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttg 101
||||||||||||| |||||| || ||||||||| ||||||||||||
Sbjct: 75 tgtctagattcattgtactatgaaatgtcacatccggtactaggttg 29
>RF00906;MIR1122;AP008207.1/915692-915536 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 59 tagattcatagtactaggatgtgtcacatctggtactaggttg 101
||||||||| |||||| || |||||||||||||| ||||||||
Sbjct: 71 tagattcattgtactatgaagtgtcacatctggtcctaggttg 29
>RF00906;MIR1122;AL731623.3/93743-93613 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 54 atgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||||| ||| ||||||||||||||||
Sbjct: 77 atgtctagattcatcgtattaggatgtgtcacatc 43
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa Japonica
Group
Length = 122
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||| |||||||| |||||||||||||||||||| |||| |||||||||
Sbjct: 75 tgtccagattcatcgtactaggatgtgtcacatcccgtacggggttggttt 25
>RF00906;MIR1122;AAAA02030593.1/3842-3702 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||| ||||||||||||||||||
Sbjct: 42 atgtgacatatactagtactacgaatctgg 71
>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
Group
Length = 115
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
||||||||||| | ||||||||||||||||||||
Sbjct: 41 tgtctagattcgttgtactaggatgtgtcacatc 74
>RF00906;MIR1122;AACV01010712.1/16660-16524 39947:Oryza sativa
Japonica Group
Length = 137
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||||||||||| |||||||||||||
Sbjct: 43 atgtgacatattctaggactacgaatctgg 72
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 52.0 bits (26), Expect = 1e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 60 agattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||||| |||||||||||||||||||||| ||| |||| ||||||
Sbjct: 70 agattcgtagtactaggatgtgtcacatccagtattaggctggttt 25
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||| ||||||||||||||||||||||
Sbjct: 86 agattcgtagtactaggatgtgtcacatc 114
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| || ||||||||||||||||||
Sbjct: 43 atgtgacacatcctagtactacgaatctgg 72
>RF00906;MIR1122;AC130604.4/103163-103007 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatct 89
||||||||||||||||| ||||||||||||
Sbjct: 88 agattcatagtactaggttgtgtcacatct 117
>RF00906;MIR1122;AAAA02010154.1/13546-13428 39946:Oryza sativa
Indica Group
Length = 119
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaat 44
||||||||||||||||||||||||||
Sbjct: 43 atgtgacatattctagtactacgaat 68
>RF00906;MIR1122;AP001073.1/31422-31289 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||| ||||||||||||||||||||||
Sbjct: 60 tgtccagattcgtagtactaggatgtgtcacatc 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| || ||||||||||||||||||
Sbjct: 92 atgtgacacatcctagtactacgaatctgg 63
>RF00906;MIR1122;AACV01013467.1/37098-37256 39947:Oryza sativa
Japonica Group
Length = 159
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
||||||||||| ||||||||||||||||| ||||
Sbjct: 75 tgtctagattcgtagtactaggatgtgtcccatc 42
>RF00906;MIR1122;AL606691.4/149690-149555 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
||||||||||||||||||||| || |||||||||
Sbjct: 75 tgtctagattcatagtactagaatatgtcacatc 42
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatct 46
||||||||||||||||||||| ||||||
Sbjct: 43 atgtgacatattctagtactatgaatct 70
>RF00906;MIR1122;AL606656.3/84170-84034 39947:Oryza sativa
Japonica Group
Length = 137
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||||||||||| |||||||||||||
Sbjct: 95 atgtgacatattctaggactacgaatctgg 66
>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 1e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 48 ggctgtatgtctagattcatagtactaggatgtgtcacatct 89
|||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 76 ggctttatgtccagattcatcatactaggatgtgtcacatct 117
>RF00906;MIR1122;AAAA02021210.1/61042-60904 39946:Oryza sativa
Indica Group
Length = 139
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||||||||||||||||||||| ||||
Sbjct: 78 agattcatagtactaggatgtgtcccatc 50
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 12 ggaccgaatgtgacatattctagtactacgaatctgg 48
|||||| ||||| ||| ||||||||||||||||||||
Sbjct: 36 ggaccggatgtggcattttctagtactacgaatctgg 72
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||||||||| ||||||||||||||||
Sbjct: 88 agattcatagtattaggatgtgtcacatc 116
>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa
Japonica Group
Length = 110
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatct 89
|||||||||||| || ||||||| |||||||||||||
Sbjct: 34 tatgtctagatttattgtactagaatgtgtcacatct 70
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 50.1 bits (25), Expect = 6e-06
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgggctgta--tgtctagattcatagtactagg 76
|||||| || |||||||||||||||||||| | | |||| ||||| ||||||||||
Sbjct: 43 atgtgatattttctagtactacgaatctggacagagcttgtcccgattcgtagtactagg 102
Query: 77 atgtgtcacatc 88
||||||||||||
Sbjct: 103 atgtgtcacatc 114
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 52 gtatgtctagattcatagtactaggatgtgtcacatc 88
||||||| |||||||| |||||||||||||||||||
Sbjct: 80 gtatgtccagattcattatactaggatgtgtcacatc 116
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgtcacatctggta 93
|||||| |||||||||||| || ||||||||||||| ||||
Sbjct: 68 tatgtccagattcatagtattatgatgtgtcacatccggta 108
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 62/74 (83%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg----gctgtatgtctagattcatagtacta 74
||||||| ||| ||||||| |||||||||| ||| |||||| |||||| | ||||||
Sbjct: 43 atgtgacttatcctagtacaacgaatctggacaggctttatgtccagattcgttgtacta 102
Query: 75 ggatgtgtcacatc 88
| ||||||||||||
Sbjct: 103 gaatgtgtcacatc 116
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa
Japonica Group
Length = 147
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 57 tctagattcatagtactaggatgtgtcacatct 89
|||||||||||||||||| || |||||||||||
Sbjct: 73 tctagattcatagtactatgaagtgtcacatct 41
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||||| ||||||||||||||||||||
Sbjct: 70 agattcattgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02011336.1/16807-16694 39946:Oryza sativa
Indica Group
Length = 114
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 60 agattcatagtactaggatgtgtcacatc 88
|||||| ||||||||||||||||||||||
Sbjct: 66 agattcgtagtactaggatgtgtcacatc 38
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| || ||||||||||||||||||
Sbjct: 39 atgtgacacatcctagtactacgaatctgg 68
>RF00906;MIR1122;AC217198.1/129397-129553 4537:Oryza punctata
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 62/74 (83%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 17 gaatgtgacatattctagtactacgaatctgg----gctgtatgtctagattcatagtac 72
|||||||||| | ||||||||||||||||||| ||| ||||||||||| ||||||
Sbjct: 41 gaatgtgacacaatctagtactacgaatctggacatgcttcttgtctagattcgtagtac 100
Query: 73 taggatgtgtcaca 86
||| |||||||||
Sbjct: 101 tagattgtgtcaca 114
>RF00906;MIR1122;AC090120.8/86565-86433 4530:Oryza sativa (rice)
Length = 133
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatc 88
||||||||| |||||||||||||||||||
Sbjct: 64 agattcataatactaggatgtgtcacatc 92
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 52 gtatgtctagattcatagtactaggatgtgtcacatc 88
|||||||||||||||| ||||||||| |||||||||
Sbjct: 78 gtatgtctagattcattatactaggatatgtcacatc 42
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 52 gtatgtctagattcatagtactaggatgtgtcacatc 88
||||||| |||||||| ||| ||||||||||||||||
Sbjct: 35 gtatgtccagattcatcgtattaggatgtgtcacatc 71
>RF00906;MIR1122;AP008217.1/27843705-27843861 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 6e-06
Identities = 62/74 (83%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctg----ggctgtatgtctagattcatagtacta 74
||||||| ||| ||||||||||||||||| || ||||||| |||||||||||||||
Sbjct: 43 atgtgacgtatcctagtactacgaatctggacagggagtatgtccagattcatagtacta 102
Query: 75 ggatgtgtcacatc 88
| || |||| ||||
Sbjct: 103 gaatatgtcccatc 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gacatattctagtactacgaatctgg 48
||||||||||||||||| ||||||||
Sbjct: 111 gacatattctagtactatgaatctgg 86
>RF00906;MIR1122;AP004012.3/83493-83639 39947:Oryza sativa
Japonica Group
Length = 147
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 52 gtatgtctagattcatagtactaggatgtgtca 84
||||||| | |||||||||||||||||||||||
Sbjct: 52 gtatgtccatattcatagtactaggatgtgtca 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 60 agattcatagtactaggatgtgtcacatctggtactaggtt 100
|||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 84 agattcgtagtactagga--tgtcacatttggtactaggtt 122
>RF00906;MIR1122;AP008213.1/14562972-14563105 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 57 tctagattcatagtactaggatgtgtcacatc 88
||||||||| ||||||||| ||||||||||||
Sbjct: 60 tctagattcgtagtactagaatgtgtcacatc 91
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatct 46
|||||||| |||||||||||||||||||
Sbjct: 90 atgtgacacattctagtactacgaatct 63
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 62 attcatagtactaggatgtgtcacatct 89
|||||| |||||||||||||||||||||
Sbjct: 70 attcattgtactaggatgtgtcacatct 43
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatct 46
||||||||||||||||||||| ||||||
Sbjct: 43 atgtgacatattctagtactatgaatct 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tagattcatagtactaggatgtgtcacatc 88
||||||||||||||||| || |||||||||
Sbjct: 71 tagattcatagtactagaatatgtcacatc 42
>RF00906;MIR1122;AAAA02021800.1/3616-3483 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 57 tctagattcatagtactaggatgtgtcacatc 88
||||||||| ||||||||| ||||||||||||
Sbjct: 75 tctagattcgtagtactagaatgtgtcacatc 44
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatct 46
|||||||| |||||||||||||||||||
Sbjct: 45 atgtgacacattctagtactacgaatct 72
>RF00906;MIR1122;AP004840.3/92920-92794 39947:Oryza sativa Japonica
Group
Length = 127
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 74 aggatgtgtcacatctggtactaggttggttt 105
|||||||||||||||| |||||||||| ||||
Sbjct: 72 aggatgtgtcacatcttgtactaggtttgttt 103
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 62 attcatagtactaggatgtgtcacatc 88
||||||| |||||||||||||||||||
Sbjct: 67 attcatactactaggatgtgtcacatc 41
>RF00906;MIR1122;AC084282.6/35274-35430 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgggc 50
||||||||||| ||||||||| ||||||||||
Sbjct: 43 atgtgacatatgctagtactatgaatctgggc 74
>RF00906;MIR1122;ABRL01000514.1/8970-9117 65489:Oryza barthii
Length = 148
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 54 atgtctagattcatagtactaggatgtgtcacatct 89
|||||||||||| ||||||||||||| ||| |||||
Sbjct: 76 atgtctagattcgtagtactaggatgggtctcatct 41
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 61 gattcatagtactaggatgtgtcacatc 88
|||||||| |||||||||||||||||||
Sbjct: 58 gattcatattactaggatgtgtcacatc 85
>RF00906;MIR1122;AL663000.4/107766-107906 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 54 atgtctagattcatagtactaggatgtgtcacatct 89
|||||||||||| |||| ||||||| ||||||||||
Sbjct: 76 atgtctagattcgtagtcctaggatatgtcacatct 41
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatct 46
||||||||||||||||||||| ||||||
Sbjct: 43 atgtgacatattctagtactatgaatct 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tagattcatagtactaggatgtgtcacatc 88
||||||||||||||||| || |||||||||
Sbjct: 71 tagattcatagtactagaatatgtcacatc 42
>RF00906;MIR1122;AAAA02030634.1/11870-11745 39946:Oryza sativa
Indica Group
Length = 126
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 54 atgtctagattcatagtactaggatgtgtcacatc 88
||||| |||||||||||||||||||| ||| ||||
Sbjct: 76 atgtccagattcatagtactaggatgggtctcatc 42
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 62 attcatagtactaggatgtgtcacatc 88
|||||| ||||||||||||||||||||
Sbjct: 68 attcattgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactag 97
|||| |||||| |||||||| ||||||||||||| |||||||
Sbjct: 76 tgtccagattcgtagtactaagatgtgtcacatcccgtactag 34
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 attcatagtactaggatgtgtca 84
|||||||||||||||||||||||
Sbjct: 50 attcatagtactaggatgtgtca 72
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 9e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttg 101
||||||||||||| |||||| | |||||||||||||| ||| ||||
Sbjct: 75 tgtctagattcattgtactatcaagtgtcacatctggtcctaagttg 29
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttggttt 105
|||| |||||| | |||||||||||||||||||| ||| ||| |||||||
Sbjct: 62 tgtccagattcgttgtactaggatgtgtcacatccagtattagattggttt 112
>RF00906;MIR1122;AP008211.1/18929382-18929520 39947:Oryza sativa
Japonica Group
Length = 139
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 62 attcatagtactaggatgtgtcacatctggtactaggtt 100
|||||||||||||||||||||| ||| ||||||||||
Sbjct: 72 attcatagtactaggatgtgtcgcattccgtactaggtt 110
>RF00906;MIR1122;AAAA02016998.1/2818-2950 39946:Oryza sativa Indica
Group
Length = 133
Score = 46.1 bits (23), Expect = 9e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggttg 101
||||||||||| |||||||||||| |||| ||| ||| ||||||||
Sbjct: 59 tgtctagattcgtagtactaggatatgtctaatccggtcctaggttg 105
>RF00906;MIR1122;AC119290.2/13041-12931 39947:Oryza sativa
Japonica Group
Length = 111
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 62 attcatagtactaggatgtgtcacatc 88
|||||| ||||||||||||||||||||
Sbjct: 45 attcattgtactaggatgtgtcacatc 19
>RF00906;MIR1122;AACV01013318.1/27232-27074 39947:Oryza sativa
Japonica Group
Length = 159
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 atattctagtactacgaatctgg 48
|||||||||||||||||||||||
Sbjct: 52 atattctagtactacgaatctgg 74
>RF00906;MIR1122;AACV01016857.1/872-736 39947:Oryza sativa Japonica
Group
Length = 137
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 54 atgtctagattcatagtactaggatgtgtcacatc 88
||||||| ||| |||||||||| ||||||||||||
Sbjct: 66 atgtctaaatttatagtactagaatgtgtcacatc 100
>RF00906;MIR1122;AP008211.1/22476267-22476112 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 9e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactag 97
||||||||||||| |||||| || ||||||||| ||||||||
Sbjct: 75 tgtctagattcattgtactatgaaatgtcacatccggtactag 33
>RF00906;MIR1122;AAAA02031907.1/29073-28940 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 12 ggaccgaatgtgacatattctagtactacgaatct 46
|||||| ||||||||||||||||||| | ||||||
Sbjct: 36 ggaccggatgtgacatattctagtacgatgaatct 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 56 gtctagattcatagtactaggatgtgtcacatctggtactag 97
|||||||||||| ||||||| || ||||||||| ||| ||||
Sbjct: 74 gtctagattcatcgtactagaatatgtcacatccggtcctag 33
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa
Japonica Group
Length = 119
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 62 attcatagtactaggatgtgtcacatc 88
|||||| ||||||||||||||||||||
Sbjct: 68 attcattgtactaggatgtgtcacatc 42
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtca 84
|||| |||||||| ||||||||||||||||
Sbjct: 36 tgtccagattcattgtactaggatgtgtca 65
>RF00906;MIR1122;AAAA02004369.1/19477-19347 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgt 80
||||||||||| ||||||||||||||
Sbjct: 72 tgtctagattcgtagtactaggatgt 47
>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| ||||| || ||||||||||||||||||||
Sbjct: 82 tgtccagatttattgtactaggatgtgtcacatc 115
>RF00906;MIR1122;AAAA02035091.1/6870-7011 39946:Oryza sativa
Indica Group
Length = 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| ||||||||||||||||||||
Sbjct: 43 atgtgacactttctagtactacgaatctgg 72
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||||||||||| | ||||||||
Sbjct: 43 atgtgacatattctagtacgatgaatctgg 72
>RF00906;MIR1122;AAAA02029204.1/1438-1301 39946:Oryza sativa
Indica Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| ||| |||||||||||||||||
Sbjct: 43 atgtgacacattttagtactacgaatctgg 72
>RF00906;MIR1122;AAAA02021026.1/44639-44772 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tagtactaggatgtgtcacatc 88
||||||||||||||||||||||
Sbjct: 73 tagtactaggatgtgtcacatc 94
>RF00906;MIR1122;AP006753.2/60246-60378 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||||| || |||||||||||||||||
Sbjct: 79 tgtccagattcattgtgctaggatgtgtcacatc 46
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 26 atattctagtactacgaatctg 47
||||||||||||||||||||||
Sbjct: 67 atattctagtactacgaatctg 46
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 60 agattcatagtactaggatgtgtcacatct 89
|||||||| ||| |||||||||||||||||
Sbjct: 70 agattcattgtattaggatgtgtcacatct 41
>RF00906;MIR1122;AL662994.3/47869-47760 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 31 ctagtactacgaatctgggctgtatgtctagattcatagtactagg 76
|||||||||||||||||| | ||| ||| |||||| ||||||||||
Sbjct: 34 ctagtactacgaatctggacagta-gtccagattcgtagtactagg 78
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||| |||||||| |||||||||
Sbjct: 115 atgtgacatatcctagtacttcgaatctgg 86
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||||| |||||||||||||||||||
Sbjct: 53 tgtccagattcattatactaggatgtgtcacatc 86
>RF00906;MIR1122;AP008216.1/3020906-3020766 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 57 tctagattcatagtactaggat 78
||||||||||||||||||||||
Sbjct: 74 tctagattcatagtactaggat 53
>RF00906;MIR1122;AP004737.3/86167-86298 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgt 82
||||||||||||||| | ||||||||||||
Sbjct: 56 tatgtctagattcattgcactaggatgtgt 85
>RF00906;MIR1122;AP008213.1/6090564-6090409 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||| |||| |||||||||||||
Sbjct: 114 atgtgacatatcctaggactacgaatctgg 85
>RF00906;MIR1122;AACV01002208.1/17153-17286 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 gacatattctagtactacgaatctgg 48
||||||| ||||||||||||||||||
Sbjct: 47 gacatatcctagtactacgaatctgg 72
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 16 cgaatgtgacatattctagtactacgaatctgggctgt 53
||||||||| || ||||||||||| |||||||| ||||
Sbjct: 40 cgaatgtgatattttctagtactatgaatctggactgt 77
>RF00906;MIR1122;AACV01022224.1/5549-5409 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||| |||||||||||||||||
Sbjct: 42 atgtgacatatattagtactacgaatctgg 71
>RF00906;MIR1122;AACV01009571.1/16790-16914 39947:Oryza sativa
Japonica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||||||||||||| ||||| ||||
Sbjct: 43 atgtgacatattctagtacaacgaacctgg 72
>RF00906;MIR1122;AACV01012241.1/1523-1654 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| ||||||||||| |||||| ||||||||||
Sbjct: 75 tgtccagattcatagtcctaggaagtgtcacatc 42
>RF00906;MIR1122;AL713933.6/72988-73123 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatctggtactaggtt 100
|||| |||||| ||||||||||| |||| |||||||| |||||||
Sbjct: 75 tgtccagattcgtagtactaggaaatgtcccatctggtcctaggtt 30
>RF00906;MIR1122;AACV01023857.1/20372-20486 39947:Oryza sativa
Japonica Group
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||| ||||||||||||||||| ||||
Sbjct: 62 tgtccagattcgtagtactaggatgtgtcccatc 95
>RF00906;MIR1122;AL731784.3/41209-41071 4530:Oryza sativa (rice)
Length = 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
||||||||| |||||||||||||||||||
Sbjct: 97 atgtgacattatctagtactacgaatctgg 68
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 59 tagattcatagtactaggatgtgtcacatc 88
||||||||| ||||||||||| ||||||||
Sbjct: 71 tagattcattgtactaggatgcgtcacatc 42
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||||| ||||||||||| ||||||||
Sbjct: 58 tgtccagattcattgtactaggatgcgtcacatc 91
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||| |||||||||| |||||||||||
Sbjct: 49 tgtccagattcgtagtactaggttgtgtcacatc 82
>RF00906;MIR1122;AAAA02020362.1/853-722 39946:Oryza sativa Indica
Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 tatgtctagattcatagtactaggatgtgt 82
||||||||||||||| | ||||||||||||
Sbjct: 56 tatgtctagattcattgcactaggatgtgt 85
>RF00906;MIR1122;AAAA02031413.1/6510-6355 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
||||||||||| | |||||||||||| |||||||
Sbjct: 82 tgtctagattcgttgtactaggatgtatcacatc 115
>RF00906;MIR1122;AACV01004468.1/36611-36456 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| ||||| || ||||||||||||||||||||
Sbjct: 82 tgtccagatttattgtactaggatgtgtcacatc 115
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 gacatattctagtactacgaatctgg 48
||||| ||||||||||||||||||||
Sbjct: 111 gacattttctagtactacgaatctgg 86
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||| | ||||||||||||||||||||
Sbjct: 43 tgtccagattcgttgtactaggatgtgtcacatc 76
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtca 84
|||| ||||||||||||||||||| |||||
Sbjct: 75 tgtccagattcatagtactaggatatgtca 46
>RF00906;MIR1122;AL731884.4/124412-124271 4530:Oryza sativa (rice)
Length = 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| ||||||||||||||||||||
Sbjct: 100 atgtgacactttctagtactacgaatctgg 71
>RF00906;MIR1122;AC084282.6/14827-14672 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 19 atgtgacatattctagtactacgaatctgg 48
|||||||| ||||||| |||||||||||||
Sbjct: 114 atgtgacacattctagaactacgaatctgg 85
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 55 tgtctagattcatagtactaggatgtgtcacatc 88
|||| |||||| ||||||||||||||||| ||||
Sbjct: 75 tgtccagattcgtagtactaggatgtgtcccatc 42
