miRNEST 2.0, an integrative microRNA resource :: BLAST
>39805_aly-MIR159b:mirbase
Length = 202
Score = 234 bits (118), Expect = 2e-62
Identities = 175/195 (89%), Gaps = 11/195 (5%)
Strand = Plus / Plus
Query: 1 ggaagagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagcta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 13 ggaagagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagcta 72
Query: 61 tggatcccataagccttatcaaattcaatataattgatgataaggnnnnnnnnatggatg 120
|||||||||||| ||||||||||||||| |||| ||| | ||||||
Sbjct: 73 tggatcccataaaccttatcaaattcaaaataa-ggatttt----------ttatggatt 121
Query: 121 ccatatctcaggagctttcacttacccctttaatggcttcactcttctttggattgaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccatatctcaggagctttcacttacccctttaatggcttcactcttctttggattgaagg 181
Query: 181 gagctcttcatctct 195
|||||||||||||||
Sbjct: 182 gagctcttcatctct 196
>39804_aly-MIR159a:mirbase
Length = 222
Score = 95.6 bits (48), Expect = 1e-20
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
||||||||||||||||||| ||| ||| |||||||| ||| ||||||||||||||||||
Sbjct: 22 agagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatgg 81
Query: 64 atcccataagcc 75
||||||||||||
Sbjct: 82 atcccataagcc 93
Score = 81.8 bits (41), Expect = 2e-16
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 137 catatctcaggagctttaacttgccc-tttaatggcttttactcttctttggattgaagg 195
Query: 181 gagctcttcatct 193
||||||| |||||
Sbjct: 196 gagctctacatct 208
>40016_ath-MIR159a:mirbase
Length = 184
Score = 77.8 bits (39), Expect = 3e-15
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 117 catatctcaggagctttaacttgccc-tttaatggcttttactcttctttggattgaagg 175
Query: 181 gagctct 187
|||||||
Sbjct: 176 gagctct 182
Score = 71.9 bits (36), Expect = 2e-13
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 4 agagctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatgg 63
|||||||||| |||||||| | ||| |||||||| ||| ||||||||||||||||||
Sbjct: 3 agagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatgg 62
Query: 64 atcccataagcc 75
||||||||||||
Sbjct: 63 atcccataagcc 74
>40311_bra-MIR159a:mirbase
Length = 185
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
||||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
Query: 67 ccataagcc 75
|||||||||
Sbjct: 68 ccataagcc 76
Score = 69.9 bits (35), Expect = 7e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 117 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 175
Query: 181 gagctct 187
|||||||
Sbjct: 176 gagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
||||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
Query: 67 ccataagcc 75
|||||||||
Sbjct: 66 ccataagcc 74
Score = 69.9 bits (35), Expect = 7e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 115 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 173
Query: 181 gagctct 187
|||||||
Sbjct: 174 gagctct 180
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 165 ttctttggattgaagggagctcttcatct 193
||||||||||||||||||||||| |||||
Sbjct: 149 ttctttggattgaagggagctctacatct 177
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatct 193
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>41918_osa-MIR159b:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatct 193
|||||||||||||||||||||| |||||
Sbjct: 156 tctttggattgaagggagctctgcatct 183
>41917_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatct 193
|||||||||||||||||||||| |||||
Sbjct: 240 tctttggattgaagggagctctgcatct 267
>41916_osa-MIR159a:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatct 193
|||||||||||||||||||||| |||||
Sbjct: 240 tctttggattgaagggagctctgcatct 267
>41868_far-MIR159:mirbase
Length = 200
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatct 193
|||||||||||||||||||||| |||||
Sbjct: 167 tctttggattgaagggagctctgcatct 194
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 164 cttctttggattgaagggagctct 187
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 164 cttctttggattgaagggagctct 187
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 164 cttctttggattgaagggagctct 187
||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctct 194
>42690_zma-MIR159a:mirbase
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatc 192
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatc 192
|||||||||||||||||||||| ||||
Sbjct: 221 tctttggattgaagggagctctgcatc 247
>42455_sof-MIR159d:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatc 192
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>42453_sof-MIR159b:mirbase
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatc 192
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctcttcatc 192
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctct 187
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctcttcatct 193
|||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 166 tctttggattgaagggagctct 187
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctcttcatct 193
|||||||||||||||||||| |||||
Sbjct: 11 tttggattgaagggagctctgcatct 36
>40397_ahy-MIR159:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 agctgctaagctatggatccca 69
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctct 187
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>40338_rco-MIR159:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctcttcatct 193
|||||||||||||||||||| |||||
Sbjct: 155 tttggattgaagggagctctacatct 180
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctcttcatctctc 196
|||||||||||||||||||| || |||||
Sbjct: 160 tttggattgaagggagctctacacctctc 188
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagctgctaagctatggatcc 67
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctct 187
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 aagctgctaagctatggatcc 67
|||||||||||||||||||||
Sbjct: 54 aagctgctaagctatggatcc 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 168 tttggattgaagggagctct 187
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
