miRNEST 2.0, an integrative microRNA resource :: BLAST
>45921_miR162:micropc
Length = 110
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctgtg 57
|||||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgtg 33
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 73 taaaagcatgaatagatcgataaacctctgcatccag 109
|||||||| ||| ||||||||||||||||||||||||
Sbjct: 74 taaaagcacgaacagatcgataaacctctgcatccag 110
>45508_miR162:micropc
Length = 108
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctgtg 57
||||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgtg 32
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 73 taaaagcatgaatagatcgataaacctctgcatcca 108
|||||||| ||| |||||||||||||||||||||||
Sbjct: 73 taaaagcacgaacagatcgataaacctctgcatcca 108
>46549_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccag 109
||||||| |||||||||||||||||||||||
Sbjct: 62 catgaatcgatcgataaacctctgcatccag 92
>46096_miR162:micropc
Length = 87
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 aaagcatgaatagatcgataaacctctgcatccag 109
|||||| |||| | |||||||||||||||||||||
Sbjct: 53 aaagcaagaatcggtcgataaacctctgcatccag 87
>46039_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccag 109
||||||| |||||||||||||||||||||||
Sbjct: 62 catgaatcgatcgataaacctctgcatccag 92
>45545_miR162:micropc
Length = 91
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccag 109
||||||| |||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatccag 91
>46676_miR162:micropc
Length = 97
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 76 aagcatgaatagatcgataaacctctgcatccag 109
|||||||||| |||||||||||||||||||||||
Sbjct: 64 aagcatgaatcgatcgataaacctctgcatccag 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctgtgaa 59
||||||||||||||||||||||| ||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtgaa 35
>46511_miR162:micropc
Length = 89
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctg 55
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatcca 108
||||||| ||||||||||||||||||||||
Sbjct: 60 catgaatcgatcgataaacctctgcatcca 89
>46504_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctg 55
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatcca 108
||||||| ||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
>45903_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctg 55
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatcca 108
||||||| ||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
>44934_miR162:micropc
Length = 97
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 76 aagcatgaatagatcgataaacctctgcatccag 109
|||||||||| |||||||||||||||||||||||
Sbjct: 64 aagcatgaatcgatcgataaacctctgcatccag 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctgtgaa 59
||||||||||||||||||||||| ||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtgaa 35
>44920_miR162:micropc
Length = 85
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctg 55
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 75 aaagcatgaatagatcgataaacctctgcatcca 108
|||||| |||| | ||||||||||||||||||||
Sbjct: 52 aaagcaagaatcggtcgataaacctctgcatcca 85
>46456_miR162:micropc
Length = 89
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 27 ggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctg 32
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 74 aaaagcatgaatagatcgataaacctctgcatccag 109
|||| |||||| |||||||||||||||||||||||
Sbjct: 54 aaaaacatgaaccgatcgataaacctctgcatccag 89
>46394_miR162:micropc
Length = 95
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 76 aagcatgaatagatcgataaacctctgcatcca 108
|||||||||| ||||||||||||||||||||||
Sbjct: 63 aagcatgaatcgatcgataaacctctgcatcca 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctgtgaa 59
|||||||||||||||||||||| ||||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtgaa 34
>46364_miR162:micropc
Length = 95
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 76 aagcatgaatagatcgataaacctctgcatcca 108
|||||||||| ||||||||||||||||||||||
Sbjct: 63 aagcatgaatcgatcgataaacctctgcatcca 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctgtgaa 59
|||||||||||||||||||||| ||||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtgaa 34
>45283_miR162:micropc
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 27 ggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctg 31
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 74 aaaagcatgaatagatcgataaacctctgcatcca 108
|||| |||||| ||||||||||||||||||||||
Sbjct: 53 aaaaacatgaaccgatcgataaacctctgcatcca 87
>46817_miR162:micropc
Length = 93
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccag 109
||||||| |||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatc 47
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>44984_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
||||| |||||||||||||||||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctcttcctg 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 65 tcgataaacctctgcatccag 85
>46792_miR162:micropc
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctg 55
|||| |||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 64 tcgataaacctctgcatcca 83
>46597_miR162:micropc
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatcca 108
||||||| ||||||||||||||||||||||
Sbjct: 62 catgaatcgatcgataaacctctgcatcca 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatc 47
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>45991_miR162:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 81 gaatcgatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 84 gaatcgatcgataaacctctgcatccag 111
>45749_miR162:micropc
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>45617_miR162:micropc
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatct 48
||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatct 24
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccag 109
||||||| | |||||||||||||||||||||
Sbjct: 58 catgaatcggtcgataaacctctgcatccag 88
>46457_miR162:micropc
Length = 109
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatcca 108
|||| ||||||||||||||||||||||
Sbjct: 83 gaatcgatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatcca 108
|||| ||||||||||||||||||||||
Sbjct: 71 gaatcgatcgataaacctctgcatcca 97
>46026_miR162:micropc
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
||||| |||||||||||||||||| ||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctg 31
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccag 109
||||||| | |||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatccag 87
>45757_miR162:micropc
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatct 48
|||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatct 23
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatcca 108
||||||| | ||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatcca 86
>44845_miR162:micropc
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatcca 108
|||| ||||||||||||||||||||||
Sbjct: 80 gaatcgatcgataaacctctgcatcca 106
>46557_miR162:micropc
Length = 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcctg 55
|||| |||||||||||||||||| ||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctg 30
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatcca 108
||||||| | ||||||||||||||||||||
Sbjct: 56 catgaatcggtcgataaacctctgcatcca 85
>46628_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcc 53
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>46169_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcc 53
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>45084_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcc 53
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>44890_miR162:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcc 53
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141
>44807_miR162:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcc 53
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141
>46470_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcc 53
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcc 53
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcc 53
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45416_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcc 53
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
>45279_miR162:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| ||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>45197_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 26 tggaggcagcggttcatcgatctcttcc 53
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
