miRNEST 2.0, an integrative microRNA resource :: BLAST
>39812_aly-MIR162a:mirbase
Length = 228
Score = 165 bits (83), Expect = 1e-41
Identities = 127/140 (90%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 1 tagttggaagaagagtgagagtcgctggaggcagcggttcatcgatctcttcctgtgaac 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 44 tagttggaaaaagagtgagagtcgctggaggcagcggttcatcgatctcttcctgggaac 103
Query: 61 ----acattaaaaatgtaaaagcatgaatagatcgataaacctctgcatccagcgtttgc 116
| || || | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gaatatataaatattgaaaaagcatgaatagatcgataaacctctgcatccagcgtttgc 163
Query: 117 ctcttgtatctttcttattg 136
||||| ||||||| ||||||
Sbjct: 164 ctctt-tatctttgttattg 182
>39813_aly-MIR162b:mirbase
Length = 184
Score = 71.9 bits (36), Expect = 1e-13
Identities = 79/92 (85%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 20 agtcgctggaggcagcggttcatcgatctcttcctgtgaacacattaaaaatgtaaaagc 79
|||||||||||||||||||||||||||| |||||||||| | || | ||||||
Sbjct: 45 agtcgctggaggcagcggttcatcgatcaattcctgtgaatatttttgttttc-aaaagc 103
Query: 80 atgaatagatcgataaacctctgcatccagcg 111
|||||| |||||||||||||||||||||||||
Sbjct: 104 atgaatcgatcgataaacctctgcatccagcg 135
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
|||| |||||||||||||||||||||||||||||||
Sbjct: 8 agtcactggaggcagcggttcatcgatctcttcctg 43
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccagcgtt 113
||||||| |||||||||||||||||||||||||||
Sbjct: 70 catgaatcgatcgataaacctctgcatccagcgtt 104
>40025_ath-MIR162b:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 20 agtcgctggaggcagcggttcatcgatctcttcctgtgaa 59
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 7 agtcgctggaggcagcggttcatcgatcaattcctgtgaa 46
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 74 aaaagcatgaatagatcgataaacctctgcatccagcg 111
|||| |||||| |||||||||||||||||||||||||
Sbjct: 63 aaaaacatgaaccgatcgataaacctctgcatccagcg 100
>41090_tcc-MIR162:mirbase
Length = 131
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctg 51
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccag 109
|||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatccag 111
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctg 54
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccagcg 111
||||||| |||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccagcg 116
>40342_rco-MIR162:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctg 34
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 78 gcatgaatagatcgataaacctctgcatccagcg 111
|||||||| |||||||||||||||||||||||||
Sbjct: 65 gcatgaatcgatcgataaacctctgcatccagcg 98
>41220_csi-MIR162:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccagcg 111
||||||| |||||||||||||||||||||||||
Sbjct: 151 catgaatcgatcgataaacctctgcatccagcg 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 agtcgctggaggcagcggttcatcgatc 47
|||| |||||||||||||||||||||||
Sbjct: 84 agtcactggaggcagcggttcatcgatc 111
>40437_gma-MIR162:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccagcg 111
||||||| |||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcg 95
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
|||| ||||| |||||||||||||||||||||||||
Sbjct: 5 agtcactggatgcagcggttcatcgatctcttcctg 40
>41578_vvi-MIR162:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
|||| ||||| |||||||||||||||||||||||||
Sbjct: 4 agtcactggatgcagcggttcatcgatctcttcctg 39
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccagcgtt 113
|||||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcgtt 97
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||| ||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctg 41
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccag 109
|||||||||||||||||||||||
Sbjct: 76 gatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
|||||||||||||||||||||||| ||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctg 41
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatccag 109
|||||||||||||||||||||||
Sbjct: 76 gatcgataaacctctgcatccag 98
>40663_mtr-MIR162:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 79 catgaatagatcgataaacctctgcatccagcg 111
||||||| | |||||||||||||||||||||||
Sbjct: 77 catgaatcggtcgataaacctctgcatccagcg 109
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 25 ctggaggcagcggttcatcgatctcttcctg 55
||||| |||||||||||||||||| ||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctg 51
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| |||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatcc 107
|||| |||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatccag 109
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 82 gaatagatcgataaacctctgcatccag 109
|||| ||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
