miRNEST 2.0, an integrative microRNA resource :: BLAST
>39813_aly-MIR162b:mirbase
Length = 184
Score = 155 bits (78), Expect = 8e-39
Identities = 97/103 (94%), Gaps = 4/103 (3%)
Strand = Plus / Plus
Query: 1 gagtgaagtcgctggaggcagcggttcatcgatcaattcctgtgaatatttatttttgtt 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 39 gagtgaagtcgctggaggcagcggttcatcgatcaattcctgtgaa----tatttttgtt 94
Query: 61 tacaaaagcaagaatcgatcgataaacctctgcatccagcgct 103
| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 95 ttcaaaagcatgaatcgatcgataaacctctgcatccagcgct 137
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccagcgct 103
||||||||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgct 185
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 gagtgaagtcgctggaggcagcggttcatcgatca 35
|||||||||| ||||||||||||||||||||||||
Sbjct: 78 gagtgaagtcactggaggcagcggttcatcgatca 112
>40437_gma-MIR162:mirbase
Length = 102
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccagcgct 103
||||||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgct 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
|||||||| ||||| |||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatc 32
>40342_rco-MIR162:mirbase
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccagcgct 103
||||||||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccagcgct 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctggaggcagcggttcatcgatc 34
|||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatc 26
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 7 agtcgctggaggcagcggttcatcgatcaattcctgtgaa 46
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctgtgaa 59
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccagcgc 102
|||||||||||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccagcgc 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 12 ctggaggcagcggttcatcgatcaattcctgtgaat 47
||||||||||||||||||||||| |||||| ||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaat 59
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccagcg 101
||||||||||||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatccagcg 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 6 aagtcgctggaggcagcggttcatcgatcaattcctgtgaat 47
||||| ||||||||||||||||||||||| |||||| ||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaat 48
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 64 aaaagcaagaatcgatcgataaacctctgcatccagcg 101
||||||| |||| |||||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccagcg 158
>41578_vvi-MIR162:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 69 caagaatcgatcgataaacctctgcatccagcg 101
||||||||| |||||||||||||||||||||||
Sbjct: 63 caagaatcggtcgataaacctctgcatccagcg 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 tgaagtcgctggaggcagcggttcatcgatc 34
||||||| ||||| |||||||||||||||||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatc 31
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccag 99
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccag 99
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 76 cgatcgataaacctctgcatccagcgct 103
||||||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagcgct 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctggaggcagcggttcatcgatc 34
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>40663_mtr-MIR162:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccagcgct 103
|||||| |||||||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatccagcgct 111
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatcc 97
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41090_tcc-MIR162:mirbase
Length = 131
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tcgatcgataaacctctgcatccag 99
|||||||||||||||||||||||||
Sbjct: 87 tcgatcgataaacctctgcatccag 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 12 ctggaggcagcggttcatcgatcaattcctgtgaat 47
||||||||||||||||||||||| |||||| ||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctgggaat 56
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccag 99
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccag 99
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcgatcgataaacctctgcatccag 99
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 cgatcgataaacctctgcatccag 99
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctggaggcagcggttcatcgatc 34
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 cgatcgataaacctctgcatccag 99
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctggaggcagcggttcatcgatc 34
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
