miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39815_aly-MIR163:mirbase
          Length = 455

 Score = 85.7 bits (43), Expect = 2e-17
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 181 tttggaggtgaaatggaacgcgtaattgatgactcctacgtggaacctctt 231
           |||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 269 tttggaggtgaaatggaacgcgtaattgatgactcctatgtggaaactctt 319



 Score = 69.9 bits (35), Expect = 1e-12
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 266 agtgcttaaatcgtagatgctaaagtcgttgaagaggacttggaact 312
           |||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct: 354 agtgcttaaatcgttgaggctgaagtcgttgaagaggacttggaact 400



 Score = 63.9 bits (32), Expect = 7e-11
 Identities = 49/54 (90%), Gaps = 3/54 (5%)
 Strand = Plus / Plus

                                                                 
Query: 38  acaacgatttcaacactctcttccaggaacaacttcctccaggcagatgatact 91
           |||||||||||||||||||||| ||||   ||||||||||||||||| ||||||
Sbjct: 81  acaacgatttcaacactctcttacagg---aacttcctccaggcagaagatact 131



 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 35/38 (92%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                 
Query: 4   cggtggataaaatcgagttccaa--cctcttcaacgac 39
           |||||||||| ||||||||||||  |||||||||||||
Sbjct: 415 cggtggataagatcgagttccaagtcctcttcaacgac 378




>39814_aly-MIR163:mirbase
          Length = 455

 Score = 85.7 bits (43), Expect = 2e-17
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 181 tttggaggtgaaatggaacgcgtaattgatgactcctacgtggaacctctt 231
           |||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 269 tttggaggtgaaatggaacgcgtaattgatgactcctatgtggaaactctt 319



 Score = 69.9 bits (35), Expect = 1e-12
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 266 agtgcttaaatcgtagatgctaaagtcgttgaagaggacttggaact 312
           |||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct: 354 agtgcttaaatcgttgaggctgaagtcgttgaagaggacttggaact 400



 Score = 63.9 bits (32), Expect = 7e-11
 Identities = 49/54 (90%), Gaps = 3/54 (5%)
 Strand = Plus / Plus

                                                                 
Query: 38  acaacgatttcaacactctcttccaggaacaacttcctccaggcagatgatact 91
           |||||||||||||||||||||| ||||   ||||||||||||||||| ||||||
Sbjct: 81  acaacgatttcaacactctcttacagg---aacttcctccaggcagaagatact 131



 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 35/38 (92%), Gaps = 2/38 (5%)
 Strand = Plus / Minus

                                                 
Query: 4   cggtggataaaatcgagttccaa--cctcttcaacgac 39
           |||||||||| ||||||||||||  |||||||||||||
Sbjct: 415 cggtggataagatcgagttccaagtcctcttcaacgac 378