miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46955_ath-miR167d:pmrd
Length = 377
Score = 581 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 1 tgttggtttttagaagctgaagctgccagcatgatctggtaatcgctacatacgacatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttggtttttagaagctgaagctgccagcatgatctggtaatcgctacatacgacatac 60
Query: 61 acacatcactaaacttctttataatttatgcacacacatacagctcttaatggccacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acacatcactaaacttctttataatttatgcacacacatacagctcttaatggccacaac 120
Query: 121 tcaaagttataattagtgcatgatctctagttatttgactgcttttaatatatgtttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaagttataattagtgcatgatctctagttatttgactgcttttaatatatgtttatg 180
Query: 181 gattcacgcatgtgtgtgtatgtacataatttacatgcatgcactttgtgtatggtacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattcacgcatgtgtgtgtatgtacataatttacatgcatgcactttgtgtatggtacac 240
Query: 241 atcaatttgaacccgttcaaaattctgtttttattagtatatatatagatgta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcaatttgaacccgttcaaaattctgtttttattagtatatatatagatgta 293
Score = 107 bits (54), Expect = 6e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 324 ttatagatagtagtactaggtcatcctgcagcttcagtcactaaatcaccaaca 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatagatagtagtactaggtcatcctgcagcttcagtcactaaatcaccaaca 377
>46956_ath-miR167m:pmrd
Length = 342
Score = 547 bits (276), Expect = e-156
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggtaatcgctacatacgacatacacacatcactaaacttc 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctggtaatcgctacatacgacatacacacatcactaaacttc 60
Query: 78 tttataatttatgcacacacatacagctcttaatggccacaactcaaagttataattagt 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttataatttatgcacacacatacagctcttaatggccacaactcaaagttataattagt 120
Query: 138 gcatgatctctagttatttgactgcttttaatatatgtttatggattcacgcatgtgtgt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcatgatctctagttatttgactgcttttaatatatgtttatggattcacgcatgtgtgt 180
Query: 198 gtatgtacataatttacatgcatgcactttgtgtatggtacacatcaatttgaacccgtt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtatgtacataatttacatgcatgcactttgtgtatggtacacatcaatttgaacccgtt 240
Query: 258 caaaattctgtttttattagtatatatatagatgta 293
||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaaattctgtttttattagtatatatatagatgta 276
Score = 71.9 bits (36), Expect = 3e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 324 ttatagatagtagtactaggtcatcctgcagcttca 359
||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttatagatagtagtactaggtcatcctgcagcttca 342
>54373_pts-miR167:pmrd
Length = 409
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggtaat 43
||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctggtaat 26
>51350_ppl-miR167b:pmrd
Length = 431
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggtaat 43
||||||||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctggtaat 36
>50425_osa-miRf11210-akr:pmrd
Length = 112
Score = 50.1 bits (25), Expect = 1e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 ttagaagctgaagctgccagcatgatctg 38
|||| ||||||||||||||||||||||||
Sbjct: 4 ttaggagctgaagctgccagcatgatctg 32
>50424_osa-miRf11209-akr:pmrd
Length = 124
Score = 50.1 bits (25), Expect = 1e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 ttagaagctgaagctgccagcatgatctg 38
|||| ||||||||||||||||||||||||
Sbjct: 10 ttaggagctgaagctgccagcatgatctg 38
>48867_osa-miR167i:pmrd
Length = 201
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 gctgaagctgccagcatgatctggt 40
|||||||||||||||||||||||||
Sbjct: 9 gctgaagctgccagcatgatctggt 33
>48862_osa-miR167d:pmrd
Length = 110
Score = 50.1 bits (25), Expect = 1e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 ttagaagctgaagctgccagcatgatctg 38
|||| ||||||||||||||||||||||||
Sbjct: 3 ttaggagctgaagctgccagcatgatctg 31
>48673_ini-miR167:pmrd
Length = 271
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggtaa 42
|||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctggtaa 25
>48556_gma-miR167c:pmrd
Length = 375
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggtaa 42
|||||||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctggtaa 35
>54983_zma-miR167f:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 agctgaagctgccagcatgatctg 38
||||||||||||||||||||||||
Sbjct: 18 agctgaagctgccagcatgatctg 41
>54982_zma-miR167e:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 agctgaagctgccagcatgatctg 38
||||||||||||||||||||||||
Sbjct: 18 agctgaagctgccagcatgatctg 41
>54433_sbi-miR167g:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 agctgaagctgccagcatgatctg 38
||||||||||||||||||||||||
Sbjct: 18 agctgaagctgccagcatgatctg 41
>54430_sbi-miR167d:pmrd
Length = 148
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 agctgaagctgccagcatgatctg 38
||||||||||||||||||||||||
Sbjct: 18 agctgaagctgccagcatgatctg 41
>48868_osa-miR167j:pmrd
Length = 160
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 agctgaagctgccagcatgatctg 38
||||||||||||||||||||||||
Sbjct: 23 agctgaagctgccagcatgatctg 46
>54984_zma-miR167g:pmrd
Length = 243
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggt 40
|||||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctggt 43
>54797_vvi-miR167a:pmrd
Length = 351
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggt 40
|||||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctggt 33
>54429_sbi-miR167c:pmrd
Length = 133
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggt 40
|||||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctggt 43
>48863_osa-miR167e:pmrd
Length = 273
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctggt 40
|||||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctggt 33
>54988_zma-miR167k:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctgg 39
||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctgg 22
>54987_zma-miR167j:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctgg 39
||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctgg 22
>54986_zma-miR167i:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctgg 39
||||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctgg 42
>54985_zma-miR167h:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctgg 39
||||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctgg 42
>54990_zma-miR167m:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54989_zma-miR167l:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54654_ssp-miR167:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54635_sof-miR167b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54634_sof-miR167a:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54434_sbi-miR167h:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>54432_sbi-miR167f:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>54431_sbi-miR167e:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>51646_ptc-miR167e:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>49693_osa-miRf10478-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 80 tgaagctgccagcatgatctg 60
>49692_osa-miRf10477-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatctg 38
>48870_osa-miR167n:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>48869_osa-miR167m:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>48866_osa-miR167h:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48865_osa-miR167g:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48864_osa-miR167f:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
>48678_lja-miR167:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatctg 41
>48559_gma-miR167o:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 89 tgaagctgccagcatgatctg 109
>48558_gma-miR167n:pmrd
Length = 64
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatctg 21
>48420_cle-miR167:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgaagctgccagcatgatctg 38
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatctg 31
