miRNEST 2.0, an integrative microRNA resource :: BLAST
>39833_aly-MIR168b:mirbase
Length = 176
Score = 198 bits (100), Expect = 7e-52
Identities = 118/124 (95%)
Strand = Plus / Plus
Query: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggctgacaccgacac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 25 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattagctgacaattacac 84
Query: 61 gtgtcttgtcatggttggtttgtgagctcccgtcttgtatcaactgaatcggagtccgag 120
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 85 gtgtgttgtcatggttggtttgtgagatcccgtcttgtatcaactgaatcggagtccgag 144
Query: 121 gtga 124
||||
Sbjct: 145 gtga 148
>40271_bna-MIR168:mirbase
Length = 133
Score = 101 bits (51), Expect = 1e-22
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 5 cggcggtctcggattcgcttggtgcaggtcgggaactgattggctgacaccgacacgtgt 64
|||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgattggctgacaccgccacgtgg 63
Query: 65 cttgtcatggttggtttgtgagc 87
||| ||||||||| ||||||||
Sbjct: 64 ctttccatggttggcttgtgagc 86
>41101_tcc-MIR168:mirbase
Length = 167
Score = 83.8 bits (42), Expect = 3e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggctg 50
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctg 52
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
||||| |||| |||||||||||||||| ||| |||||
Sbjct: 126 tcccgccttgcatcaactgaatcggagaccgcggtga 162
>41215_crt-MIR168:mirbase
Length = 201
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggct 49
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 51
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
||||| |||| |||||||||||||||| |||||||||
Sbjct: 142 tcccgccttgcatcaactgaatcggagaccgaggtga 178
>41210_ccl-MIR168:mirbase
Length = 176
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggct 49
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 50
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 88 tcccgtcttgtatcaactgaatcggagtccgaggtg 123
||||| |||| |||||||||||||||| ||||||||
Sbjct: 141 tcccgccttgcatcaactgaatcggagaccgaggtg 176
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 9 ggtctcggattcgcttggtgcaggtcgggaactgatt 45
|||||| ||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgatt 37
>40355_rco-MIR168:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 17 attcgcttggtgcaggtcgggaactgattggct 49
|||||||||||||||||||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgattggct 36
>39832_aly-MIR168a:mirbase
Length = 155
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 3 accggcggtctcggattcgcttggtgcaggtcgggaac 40
|||| ||| |||||||||||||||||||||||||||||
Sbjct: 8 accgtcgggctcggattcgcttggtgcaggtcgggaac 45
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 17 attcgcttggtgcaggtcgggaactgatt 45
|||||||||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcgggaactgatt 37
>40043_ath-MIR168a:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ctcggattcgcttggtgcaggtcgggaac 40
|||||||||||||||||||||||||||||
Sbjct: 11 ctcggattcgcttggtgcaggtcgggaac 39
>40448_gma-MIR168:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 gcggtctcggattcgcttggtgcaggtcgggaac 40
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
||||| |||| |||||||||||||||| ||| |||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtga 123
>41596_vvi-MIR168:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 attcgcttggtgcaggtcgggaac 40
||||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcgggaac 32
