miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 274 bits (138), Expect = 4e-73
Identities = 138/138 (100%)
Strand = Plus / Minus
Query: 28 gaatgagaacttgtgtggtagccaaggatgacttgcctgcgttttagaccatatatatca 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gaatgagaacttgtgtggtagccaaggatgacttgcctgcgttttagaccatatatatca 79
Query: 88 aagactcactcgatcgatagtcttagagttggttggtcgtcaggcagtctccttggctat 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aagactcactcgatcgatagtcttagagttggttggtcgtcaggcagtctccttggctat 19
Query: 148 tcaaacaattctcattct 165
||||||||||||||||||
Sbjct: 18 tcaaacaattctcattct 1
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 248 bits (125), Expect = 2e-65
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 35 aacttgtgtggtagccaaggatgacttgcctgcgttttagaccatatatatcaaagactc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacttgtgtggtagccaaggatgacttgcctgcgttttagaccatatatatcaaagactc 60
Query: 95 actcgatcgatagtcttagagttggttggtcgtcaggcagtctccttggctattcaaaca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actcgatcgatagtcttagagttggttggtcgtcaggcagtctccttggctattcaaaca 120
Query: 155 attct 159
|||||
Sbjct: 121 attct 125
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 77.8 bits (39), Expect = 5e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 27 agaatgagaacttgtgtggtagccaaggatgacttgcctgcgt 69
|||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 133 agaatgagaagttgtgtggtagccaaggatgacttgcctgcgt 91
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 38 ttgtgtggtagccaaggatgacttgcctgcgt 69
||||||||||||||||||||||||||||||||
Sbjct: 4 ttgtgtggtagccaaggatgacttgcctgcgt 35
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||||||||
Sbjct: 121 cttgtgtggtagccaaggatgacttgcctgc 91
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||||||||
Sbjct: 4 cttgtgtggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 38 ttgtgtggtagccaaggatgacttgcctgcgt 69
|||| |||||||||||||||||||||||||||
Sbjct: 6 ttgtctggtagccaaggatgacttgcctgcgt 37
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| |||||||||||||||||||||||||
Sbjct: 133 cttgtttggtagccaaggatgacttgcctgc 103
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| |||||||||||||||||||||||||
Sbjct: 129 cttgtttggtagccaaggatgacttgcctgc 99
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| |||||||||||||||||||||||||
Sbjct: 4 cttgtttggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| |||||||||||||||||||||||||
Sbjct: 4 cttgtttggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctg 66
||||| ||||||||||||||||||||||||
Sbjct: 4 cttgtttggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 119 tggtagccaaggatgacttgcctgc 95
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcctgc 125
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 142 tggtagccaaggatgacttgcctgc 118
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 135 tggtagccaaggatgacttgcctgc 111
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctgc 35
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana
(thale cress)
Length = 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctgc 67
|||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctgc 35
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 38 ttgtgtggtagccaaggatgacttgcct 65
|||| |||||||||||||||||||||||
Sbjct: 132 ttgtttggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 151 tggtagccaaggatgacttgcctg 128
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 149 tggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcctg 93
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 131 tggtagccaaggatgacttgcctg 108
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcctg 88
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 140 tggtagccaaggatgacttgcctg 117
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcctg 101
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcctg 104
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 38 ttgtgtggtagccaaggatgacttgcct 65
|||| |||||||||||||||||||||||
Sbjct: 6 ttgtttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcctg 36
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcctg 29
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcctg 66
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;ABIM01014270.1/4571-4728 3649:Carica papaya
(papaya)
Length = 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| ||||||||||| |||||||||||||
Sbjct: 148 cttgtttggtagccaagaatgacttgcctgc 118
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 148 cttgtttgatagccaaggatgacttgcctgc 118
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 154 cttgtttgatagccaaggatgacttgcctgc 124
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 139 cttgtctgatagccaaggatgacttgcctgc 109
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 38 ttgtgtggtagccaaggatgacttgcc 64
|||| ||||||||||||||||||||||
Sbjct: 116 ttgtttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 142 cttgtttgatagccaaggatgacttgcctgc 112
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 38 ttgtgtggtagccaaggatgacttgcc 64
|||| ||||||||||||||||||||||
Sbjct: 115 ttgtctggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 153 cttgtctgatagccaaggatgacttgcctgc 123
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 112 tggtagccaaggatgacttgcct 90
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 109 tggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 109 tggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 128 tggtagccaaggatgacttgcct 106
>RF00645;MIR169_2;ABIM01014270.1/4721-4577 3649:Carica papaya
(papaya)
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| ||||||||||| |||||||||||||
Sbjct: 4 cttgtttggtagccaagaatgacttgcctgc 34
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 4 cttgtttgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus
trichocarpa
Length = 151
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 4 cttgtttgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 38 ttgtgtggtagccaaggatgacttgcc 64
|||| ||||||||||||||||||||||
Sbjct: 8 ttgtctggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 4 cttgtttgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 4 cttgtctgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctgc 67
||||| || ||||||||||||||||||||||
Sbjct: 4 cttgtctgatagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcct 65
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 45 gtagccaaggatgacttgcctg 66
||||||||||||||||||||||
Sbjct: 168 gtagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 45 gtagccaaggatgacttgcctg 66
||||||||||||||||||||||
Sbjct: 167 gtagccaaggatgacttgcctg 146
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcc 64
||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcc 64
||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AARH01000344.1/552-673 3694:Populus trichocarpa
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 37 cttgtgtggtagccaaggatgacttgcctg 66
|||| |||| ||||||||||||||||||||
Sbjct: 112 cttgcgtggaagccaaggatgacttgcctg 83
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 tggtagccaaggatgacttgcc 64
||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 44 ggtagccaaggatgacttgcct 65
||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgcct 151
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana
(thale cress)
Length = 172
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 gtagccaaggatgacttgcctg 66
||||||||||||||||||||||
Sbjct: 12 gtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 gtagccaaggatgacttgcctg 66
||||||||||||||||||||||
Sbjct: 14 gtagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcc 64
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcc 64
||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000344.1/666-556 3694:Populus trichocarpa
Length = 111
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 37 cttgtgtggtagccaaggatgacttgcctg 66
|||| |||| ||||||||||||||||||||
Sbjct: 4 cttgcgtggaagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 tggtagccaaggatgacttgcc 64
||||||||||||||||||||||
Sbjct: 12 tggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa
Japonica Group
Length = 175
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ggtagccaaggatgacttgcct 65
||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgcct 31
