miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 327 bits (165), Expect = 4e-89
Identities = 165/165 (100%)
Strand = Plus / Minus
Query: 21 atagaagaatcatatttggtagccaaggatgacttgcctgactctttgtgtaaaatgttt 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atagaagaatcatatttggtagccaaggatgacttgcctgactctttgtgtaaaatgttt 106
Query: 81 agtgtcttgtttgaagtcactataagttgtatcaagcaatgaccattttgcttataaaaa 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 agtgtcttgtttgaagtcactataagttgtatcaagcaatgaccattttgcttataaaaa 46
Query: 141 agatatcaggcagtctccttggctatccttatatgttcttctctt 185
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 agatatcaggcagtctccttggctatccttatatgttcttctctt 1
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 299 bits (151), Expect = 8e-81
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 29 atcatatttggtagccaaggatgacttgcctgactctttgtgtaaaatgtttagtgtctt 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcatatttggtagccaaggatgacttgcctgactctttgtgtaaaatgtttagtgtctt 60
Query: 89 gtttgaagtcactataagttgtatcaagcaatgaccattttgcttataaaaaagatatca 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttgaagtcactataagttgtatcaagcaatgaccattttgcttataaaaaagatatca 120
Query: 149 ggcagtctccttggctatccttatatgttct 179
|||||||||||||||||||||||||||||||
Sbjct: 121 ggcagtctccttggctatccttatatgttct 151
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 190 bits (96), Expect = 5e-48
Identities = 152/167 (91%), Gaps = 4/167 (2%)
Strand = Plus / Minus
Query: 21 atagaagaatcatatttggtagccaaggatgacttgcctgactctttgtgtaaaat-gtt 79
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |
Sbjct: 167 atagaagaatcatatttggtagccaaggatgacttgcctgtttctttgagtaaaatgggt 108
Query: 80 tagtgtcttgtttg--aagtcactataagttgtatcaagcaatgaccattttgcttataa 137
||||||| |||||| |||| |||||||||| |||||||||||||||||||| || ||
Sbjct: 107 tagtgtcatgtttgacaagtgactataagttatatcaagcaatgaccattttactcat-c 49
Query: 138 aaaagatatcaggcagtctccttggctatccttatatgttcttctct 184
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aaaagacatcaggcagtctccttggctatccttatatgttcttctct 2
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 165 bits (83), Expect = 3e-40
Identities = 139/154 (90%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 29 atcatatttggtagccaaggatgacttgcctgactctttgtgtaaaatgt-ttagtgtct 87
|||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||
Sbjct: 1 atcatatttggtagccaaggatgacttgcctgtttctttgagtaaaatgggttagtgtca 60
Query: 88 tgtttga--agtcactataagttgtatcaagcaatgaccattttgcttataaaaaagata 145
||||||| ||| |||||||||| |||||||||||||||||||| || || |||| || |
Sbjct: 61 tgtttgacaagtgactataagttatatcaagcaatgaccattttactcatcaaaa-gaca 119
Query: 146 tcaggcagtctccttggctatccttatatgttct 179
||||||||||||||||||||||||||||||||||
Sbjct: 120 tcaggcagtctccttggctatccttatatgttct 153
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 127 bits (64), Expect = 7e-29
Identities = 132/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 32 atatttggtagccaaggatgacttgcctgactctttgtgtaaaatgtttagtgtcttgtt 91
||||||||||||||||||||||||||||| ||| || |||||| | |||| ||||
Sbjct: 154 atatttggtagccaaggatgacttgcctgcttctctgaacaaaatggtcgatgtcatgtt 95
Query: 92 t-gaagtcactataagttgtatcaagcaatgaccattttgcttataaaaaagatatcagg 150
| ||||| |||||||||| || |||| ||||||||||||| ||||||| | || ||||||
Sbjct: 94 ttgaagtgactataagttataccaagaaatgaccattttgtttataaata-gacatcagg 36
Query: 151 cagtctccttggctatccttatatgttcttct 182
||||||||||||||||||||||||||||||||
Sbjct: 35 cagtctccttggctatccttatatgttcttct 4
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana (thale
cress)
Length = 152
Score = 121 bits (61), Expect = 4e-27
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 32 atatttggtagccaaggatgacttgcctgactctttgtgtaaaatgtttagtgtcttgtt 91
||||||||||||||||||||||||||||| ||| || |||||| | |||| ||||
Sbjct: 5 atatttggtagccaaggatgacttgcctgcttctctgaacaaaatggtcgatgtcatgtt 64
Query: 92 t-gaagtcactataagttgtatcaagcaatgaccattttgcttataaaaaagatatcagg 150
| ||||| |||||||||| || |||| ||||||||||||| ||||||| | || ||||||
Sbjct: 65 ttgaagtgactataagttataccaagaaatgaccattttgtttataaata-gacatcagg 123
Query: 151 cagtctccttggctatccttatatgttct 179
|||||||||||||||||||||||||||||
Sbjct: 124 cagtctccttggctatccttatatgttct 152
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 121 tttggtagccaaggatgacttgcctg 96
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 129 tttggtagccaaggatgacttgcctg 104
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 125 tttggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 144 tttggtagccaaggatgacttgcctg 119
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 137 tttggtagccaaggatgacttgcctg 112
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcctg 34
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 129 tttggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;AB016889.1/38805-38989 3702:Arabidopsis thaliana
(thale cress)
Length = 185
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 25 aagaatcatatttggtagccaaggatgacttgcctga 61
|||| |||| ||| |||||||||||||||||||||||
Sbjct: 181 aagagtcatgtttagtagccaaggatgacttgcctga 145
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 146 tcaggcagtctccttggctatc 167
||||||||||||||||||||||
Sbjct: 40 tcaggcagtctccttggctatc 19
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 126 tttggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;ABXC01004203.1/1754-1629 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgcct 87
>RF00865;MIR169_5;ABXC01004204.1/1140-1015 4558:Sorghum bicolor
(sorghum)
Length = 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 111 tttggtagccaaggatgacttgcct 87
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 11 tttggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;ABXC01004203.1/1636-1748 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;ABXC01004204.1/1022-1134 4558:Sorghum bicolor
(sorghum)
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcct 59
|||||||||||||||||||||||||
Sbjct: 9 tttggtagccaaggatgacttgcct 33
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 117 tggtagccaaggatgacttgcctg 94
>RF00865;MIR169_5;AB016889.1/45011-45196 3702:Arabidopsis thaliana
(thale cress)
Length = 186
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 30 tcatatttggtagccaaggatgacttgcctga 61
|||| ||| |||||||||||||||||||||||
Sbjct: 177 tcatgtttagtagccaaggatgacttgcctga 146
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 123 tggtagccaaggatgacttgcctg 100
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 119 tttggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 118 tttggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;AASG02003632.1/18323-18451 3988:Ricinus communis
(castor bean)
Length = 129
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 113 tttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 113 tttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 48.1 bits (24), Expect = 5e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 24 gaagaatcatatttggtagccaaggatgacttgcct 59
||||| |||| |||| ||||||||||||||||||||
Sbjct: 152 gaagagtcatgtttgatagccaaggatgacttgcct 117
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 115 tggtagccaaggatgacttgcctg 92
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 116 tggtagccaaggatgacttgcctg 93
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 131 tggtagccaaggatgacttgcctg 108
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 111 tggtagccaaggatgacttgcctg 88
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 140 tggtagccaaggatgacttgcctg 117
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcctg 101
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 127 tggtagccaaggatgacttgcctg 104
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 9 tggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AY551201.1/49-220 3702:Arabidopsis thaliana
(thale cress)
Length = 172
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 30 tcatatttggtagccaaggatgacttgcctga 61
|||| ||| |||||||||||||||||||||||
Sbjct: 3 tcatgtttagtagccaaggatgacttgcctga 34
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 146 tcaggcagtctccttggctatc 167
||||||||||||||||||||||
Sbjct: 139 tcaggcagtctccttggctatc 160
>RF00645;MIR169_2;AB016889.1/45191-45017 3702:Arabidopsis thaliana
(thale cress)
Length = 175
Score = 48.1 bits (24), Expect = 5e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 30 tcatatttggtagccaaggatgacttgcctga 61
|||| ||| |||||||||||||||||||||||
Sbjct: 5 tcatgtttagtagccaaggatgacttgcctga 36
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AASG02003632.1/18444-18329 3988:Ricinus communis
(castor bean)
Length = 116
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcc 58
||||||||||||||||||||||||
Sbjct: 10 tttggtagccaaggatgacttgcc 33
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcctg 36
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa
Japonica Group
Length = 115
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcctg 34
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica
Group
Length = 123
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcctg 29
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcctg 60
||||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcctg 33
>RF00865;MIR169_5;CAAP02000122.1/24661-24522 29760:Vitis vinifera
Length = 140
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 124 tggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 112 tggtagccaaggatgacttgcct 90
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 128 tggtagccaaggatgacttgcct 106
>RF00645;MIR169_2;CAAP02000122.1/24529-24655 29760:Vitis vinifera
Length = 127
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 10 tggtagccaaggatgacttgcct 32
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 6 tggtagccaaggatgacttgcct 28
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcct 59
|||||||||||||||||||||||
Sbjct: 11 tggtagccaaggatgacttgcct 33
>RF00865;MIR169_5;ABIM01014270.1/4571-4728 3649:Carica papaya
(papaya)
Length = 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||| ||||||||||||
Sbjct: 144 tttggtagccaagaatgacttgcctg 119
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 tagccaaggatgacttgcctga 61
||||||||||||||||||||||
Sbjct: 132 tagccaaggatgacttgcctga 111
>RF00865;MIR169_5;AY551203.1/210-25 3702:Arabidopsis thaliana (thale
cress)
Length = 186
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 tagccaaggatgacttgcctga 61
||||||||||||||||||||||
Sbjct: 167 tagccaaggatgacttgcctga 146
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
|||| |||||||||||||||||||||
Sbjct: 144 tttgatagccaaggatgacttgcctg 119
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
|||| |||||||||||||||||||||
Sbjct: 150 tttgatagccaaggatgacttgcctg 125
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 35 tttggtagccaaggatgacttgcctg 60
|||| |||||||||||||||||||||
Sbjct: 138 tttgatagccaaggatgacttgcctg 113
>RF00865;MIR169_5;AASG02003632.1/6210-6338 3988:Ricinus communis
(castor bean)
Length = 129
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 37 tggtagccaaggatgacttgcc 58
||||||||||||||||||||||
Sbjct: 110 tggtagccaaggatgacttgcc 89
>RF00865;MIR169_5;AP008208.1/18658095-18658282 39947:Oryza sativa
Japonica Group
Length = 188
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 ggtagccaaggatgacttgcct 59
||||||||||||||||||||||
Sbjct: 172 ggtagccaaggatgacttgcct 151
>RF00645;MIR169_2;ABIM01014270.1/4721-4577 3649:Carica papaya
(papaya)
Length = 145
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
||||||||||||| ||||||||||||
Sbjct: 8 tttggtagccaagaatgacttgcctg 33
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 tagccaaggatgacttgcctga 61
||||||||||||||||||||||
Sbjct: 13 tagccaaggatgacttgcctga 34
>RF00645;MIR169_2;AY551203.1/30-206 3702:Arabidopsis thaliana
(thale cress)
Length = 177
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 tagccaaggatgacttgcctga 61
||||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcctga 36
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
|||| |||||||||||||||||||||
Sbjct: 8 tttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus
trichocarpa
Length = 151
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
|||| |||||||||||||||||||||
Sbjct: 8 tttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02003632.1/6331-6216 3988:Ricinus communis
(castor bean)
Length = 116
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 tggtagccaaggatgacttgcc 58
||||||||||||||||||||||
Sbjct: 13 tggtagccaaggatgacttgcc 34
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 35 tttggtagccaaggatgacttgcctg 60
|||| |||||||||||||||||||||
Sbjct: 8 tttgatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 44.1 bits (22), Expect = 8e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 30 tcatatttggtagccaaggatgacttgcct 59
|||| |||| ||||||||||||||||||||
Sbjct: 3 tcatgtttgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;AP004062.3/84631-84457 39947:Oryza sativa
Japonica Group
Length = 175
Score = 44.1 bits (22), Expect = 8e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 38 ggtagccaaggatgacttgcct 59
||||||||||||||||||||||
Sbjct: 10 ggtagccaaggatgacttgcct 31
