miRNEST 2.0, an integrative microRNA resource :: BLAST
>46977_ath-miR171a:pmrd
Length = 123
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 gagagagtccctctgatattggcctggttcactcagat 39
|||||||||||| |||||||||||||||||||||||||
Sbjct: 3 gagagagtccctttgatattggcctggttcactcagat 40
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatctcagtcctctctcg 93
|||||||||||||| | |||||||||||| ||||||||
Sbjct: 85 atctgattgagccgcgccaatatctcagtactctctcg 122
>48407_bra-miR171e:pmrd
Length = 119
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatctcagtcctctctcg 93
|||||||||||||| | |||||||||||| ||||||||
Sbjct: 81 atctgattgagccgcgccaatatctcagtgctctctcg 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tgatattggcctggttcactcagat 39
|||||||||||||||||||||||||
Sbjct: 17 tgatattggcctggttcactcagat 41
>48369_bna-miR171g:pmrd
Length = 115
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 15 tgatattggcctggttcactcagatt 40
||||||||||||||||||||||||||
Sbjct: 20 tgatattggcctggttcactcagatt 45
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatctcagtcctctctcg 93
|||||||||||||| | |||||||||||| ||||||||
Sbjct: 75 atctgattgagccgcgccaatatctcagtgctctctcg 112
>48368_bna-miR171f:pmrd
Length = 119
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatctcagtcctctctcg 93
|||||||||||||| | |||||||||||| ||||||||
Sbjct: 81 atctgattgagccgcgccaatatctcagtgctctctcg 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tgatattggcctggttcactcagat 39
|||||||||||||||||||||||||
Sbjct: 17 tgatattggcctggttcactcagat 41
>55031_zma-miR171d:pmrd
Length = 121
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatctcagtcctct 89
||||||||||||||| |||||||||||| ||||
Sbjct: 80 tctgattgagccgtgccaatatctcagtactct 112
>54455_sbi-miR171d:pmrd
Length = 154
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatctcagtcctct 89
||||||||||||||| |||||||||||| ||||
Sbjct: 113 tctgattgagccgtgccaatatctcagtactct 145
>51692_ptc-miR171i:pmrd
Length = 129
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tgatattggcctggttcactcagat 39
|||||||||||||||||||||||||
Sbjct: 10 tgatattggcctggttcactcagat 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgtcaatatctcagt 84
||||||||||||| ||||||||||||
Sbjct: 100 tgattgagccgtgccaatatctcagt 125
>54551_sly-miR171a:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tgatattggcctggttcactcaga 38
||||||||||||||||||||||||
Sbjct: 15 tgatattggcctggttcactcaga 38
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgtcaatatctcagt 84
||||||||||||| ||||||||||||
Sbjct: 87 tgattgagccgtgccaatatctcagt 112
>46980_ath-miR171m:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 gatattggcctggttcactcagat 39
||||||||||||||||||||||||
Sbjct: 1 gatattggcctggttcactcagat 24
>46975_ath-miR170m:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 gatattggcctggttcactcagat 39
||||||||||||||||||||||||
Sbjct: 1 gatattggcctggttcactcagat 24
>48898_osa-miR171d:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatctcag 83
||||||||||||||| |||||||||||
Sbjct: 103 tctgattgagccgtgccaatatctcag 129
>48723_mtr-miR171g:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gatattggcctggttcactcaga 38
|||||||||||||||||||||||
Sbjct: 6 gatattggcctggttcactcaga 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgtcaatatctca 82
||||||||||||| ||||||||||
Sbjct: 80 tgattgagccgtgccaatatctca 103
>48722_mtr-miR171d:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gatattggcctggttcactcaga 38
|||||||||||||||||||||||
Sbjct: 6 gatattggcctggttcactcaga 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 tgattgagccgtgtcaatatctca 82
||||||||||||| ||||||||||
Sbjct: 80 tgattgagccgtgccaatatctca 103
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tcatctgattgagccgtgtcaatatc 79
|||||||||||||||||| |||||||
Sbjct: 55 tcatctgattgagccgtgccaatatc 80
>51688_ptc-miR171e:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tcatctgattgagccgtgtcaatatc 79
|||||||||||||||||| |||||||
Sbjct: 60 tcatctgattgagccgtgccaatatc 85
>55032_zma-miR171e:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatctcagtcctct 89
||||||||||||||| |||||||| ||| ||||
Sbjct: 85 tctgattgagccgtgccaatatcttagtactct 117
>48899_osa-miR171e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatctcagtcctct 89
||||||||||||||| |||||||| ||| ||||
Sbjct: 87 tctgattgagccgtgccaatatcttagtgctct 119
>54836_vvi-miR171i:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatc 79
|||||||||||||||| |||||||
Sbjct: 66 atctgattgagccgtgccaatatc 89
>54828_vvi-miR171a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatc 79
|||||||||||||||| |||||||
Sbjct: 65 atctgattgagccgtgccaatatc 88
>54460_sbi-miR171i:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatct 80
||||||||||||||| ||||||||
Sbjct: 66 tctgattgagccgtgccaatatct 89
>51691_ptc-miR171h:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatc 79
|||||||||||||||| |||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>51690_ptc-miR171g:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatc 79
|||||||||||||||| |||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>51689_ptc-miR171f:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 tctgattgagccgtgtcaatatct 80
||||||||||||||| ||||||||
Sbjct: 99 tctgattgagccgtgccaatatct 122
>46877_aqc-miR171b:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 atctgattgagccgtgtcaatatc 79
|||||||||||||||| |||||||
Sbjct: 52 atctgattgagccgtgccaatatc 75
