miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39856_aly-MIR172e:mirbase
          Length = 133

 Score =  208 bits (105), Expect = 7e-55
 Identities = 121/125 (96%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtagtcgcagatgcagcaccattaagattcacaagagatgtggttccctttgctttcgcc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 5   gtagtcgcagatgcagcaccattaagattcacaagagatgtggttccctttgtttttgcc 64

                                                                       
Query: 61  tctcgatccgcagaaaagggttccttatcgagtgggaatcttgatgatgctgcatcagca 120
           |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 65  tctcgatccgaagaaaagggttcctt-tcgagtgggaatcttgatgatgctgcatcagca 123

                
Query: 121 aatac 125
           |||||
Sbjct: 124 aatac 128




>41126_tcc-MIR172c:mirbase
          Length = 163

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 93  tgggaatcttgatgatgctgcatcagcaaa 122
           ||||||||||||||||||||||||||||||
Sbjct: 121 tgggaatcttgatgatgctgcatcagcaaa 150




>41399_ptc-MIR172e:mirbase
          Length = 133

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 93  tgggaatcttgatgatgctgcatcagcaaata 124
           |||||||||||||||||||||||| |||||||
Sbjct: 102 tgggaatcttgatgatgctgcatcggcaaata 133




>41398_ptc-MIR172d:mirbase
          Length = 182

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 93  tgggaatcttgatgatgctgcatcagcaaata 124
           |||||||||||||||||||||||| |||||||
Sbjct: 151 tgggaatcttgatgatgctgcatcggcaaata 182




>41993_osa-MIR172d:mirbase
          Length = 130

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 96  gaatcttgatgatgctgcatcagcaaa 122
           |||||||||||||||||||||||||||
Sbjct: 92  gaatcttgatgatgctgcatcagcaaa 118




>41991_osa-MIR172b:mirbase
          Length = 238

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 92  gtgggaatcttgatgatgctgcatc 116
           |||||||||||||||||||||||||
Sbjct: 205 gtgggaatcttgatgatgctgcatc 229




>41768_bdi-MIR172b:mirbase
          Length = 254

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 92  gtgggaatcttgatgatgctgcatc 116
           |||||||||||||||||||||||||
Sbjct: 201 gtgggaatcttgatgatgctgcatc 225




>41183_aqc-MIR172a:mirbase
          Length = 135

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 96  gaatcttgatgatgctgcatcagca 120
           |||||||||||||||||||||||||
Sbjct: 99  gaatcttgatgatgctgcatcagca 123




>40463_gma-MIR172f:mirbase
          Length = 133

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 91  agtgggaatcttgatgatgctgcatcagc 119
           |||| ||||||||||||||||||||||||
Sbjct: 105 agtgagaatcttgatgatgctgcatcagc 133




>40462_gma-MIR172e:mirbase
          Length = 153

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 93  tgggaatcttgatgatgctgcatcagcaa 121
           |||||||||||||||||||||| ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaa 140




>40461_gma-MIR172d:mirbase
          Length = 150

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 93  tgggaatcttgatgatgctgcatcagcaa 121
           |||||||||||||||||||||| ||||||
Sbjct: 109 tgggaatcttgatgatgctgcagcagcaa 137




>40460_gma-MIR172c:mirbase
          Length = 153

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 93  tgggaatcttgatgatgctgcatcagcaa 121
           |||||||||||||||||||||| ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaa 140




>42779_zma-MIR172e:mirbase
          Length = 174

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  gtgggaatcttgatgatgctgcat 115
           ||||||||||||||||||||||||
Sbjct: 132 gtgggaatcttgatgatgctgcat 155




>42558_sbi-MIR172b:mirbase
          Length = 170

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 92  gtgggaatcttgatgatgctgcat 115
           ||||||||||||||||||||||||
Sbjct: 147 gtgggaatcttgatgatgctgcat 170




>41634_vvi-MIR172d:mirbase
          Length = 109

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 96  gaatcttgatgatgctgcatcagc 119
           ||||||||||||||||||||||||
Sbjct: 28  gaatcttgatgatgctgcatcagc 5



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 80  gaatcttgatgatgctgcat 99




>41397_ptc-MIR172c:mirbase
          Length = 128

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  gaatcttgatgatgctgcatcagc 119
           ||||||||||||||||||||||||
Sbjct: 100 gaatcttgatgatgctgcatcagc 123




>41395_ptc-MIR172a:mirbase
          Length = 129

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  gaatcttgatgatgctgcatcagc 119
           ||||||||||||||||||||||||
Sbjct: 101 gaatcttgatgatgctgcatcagc 124




>41184_aqc-MIR172b:mirbase
          Length = 108

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 93  tgggaatcttgatgatgctgcatc 116
           ||||||||||||||||||||||||
Sbjct: 84  tgggaatcttgatgatgctgcatc 107




>40459_gma-MIR172b:mirbase
          Length = 153

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  gaatcttgatgatgctgcatcagc 119
           ||||||||||||||||||||||||
Sbjct: 115 gaatcttgatgatgctgcatcagc 138




>40458_gma-MIR172a:mirbase
          Length = 159

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  gaatcttgatgatgctgcatcagc 119
           ||||||||||||||||||||||||
Sbjct: 121 gaatcttgatgatgctgcatcagc 144



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 96  gaatcttgatgatgctgcatcagcaaata 124
           |||||||||||||||| |||| |||||||
Sbjct: 40  gaatcttgatgatgctacatccgcaaata 12




>41992_osa-MIR172c:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 96  gaatcttgatgatgctgcatcagcaaa 122
           ||||||||||||||||||| |||||||
Sbjct: 82  gaatcttgatgatgctgcaccagcaaa 108




>41633_vvi-MIR172c:mirbase
          Length = 138

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 92  gtgggaatcttgatgatgctgca 114
           |||||||||||||||||||||||
Sbjct: 105 gtgggaatcttgatgatgctgca 127




>41400_ptc-MIR172f:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 91  agtgggaatcttgatgatgctgcatcagcaa 121
           |||| ||||||||||||||||||||| ||||
Sbjct: 128 agtgagaatcttgatgatgctgcatcggcaa 158




>41396_ptc-MIR172b:mirbase
          Length = 140

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 91  agtgggaatcttgatgatgctgcatcagcaa 121
           |||| ||||||||||||||||||||| ||||
Sbjct: 107 agtgagaatcttgatgatgctgcatcggcaa 137




>41128_tcc-MIR172e:mirbase
          Length = 189

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 91  agtgggaatcttgatgatgctgcatcagcaa 121
           |||| ||||||||||||||||||||| ||||
Sbjct: 145 agtgagaatcttgatgatgctgcatcggcaa 175




>41124_tcc-MIR172a:mirbase
          Length = 154

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 96  gaatcttgatgatgctgcatcagcaaa 122
           |||||||||||||||| ||||||||||
Sbjct: 37  gaatcttgatgatgctccatcagcaaa 11



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  tgggaatcttgatgatgctgca 114
           ||||||||||||||||||||||
Sbjct: 113 tgggaatcttgatgatgctgca 134




>42561_sbi-MIR172e:mirbase
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 96  gaatcttgatgatgctgcatcagcaa 121
           ||||||||||||||||||| ||||||
Sbjct: 77  gaatcttgatgatgctgcaccagcaa 102




>41767_bdi-MIR172a:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 96  gaatcttgatgatgctgcatcagcaa 121
           ||||||||||||||||||||| ||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125




>41632_vvi-MIR172b:mirbase
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 96  gaatcttgatgatgctgcatcagcaa 121
           ||||||||||||||||||||| ||||
Sbjct: 28  gaatcttgatgatgctgcatcggcaa 3




>41631_vvi-MIR172a:mirbase
          Length = 110

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 96  gaatcttgatgatgctgcatcagcaa 121
           ||||||||||||||||||||| ||||
Sbjct: 28  gaatcttgatgatgctgcatcggcaa 3




>41402_ptc-MIR172h:mirbase
          Length = 143

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  tgggaatcttgatgatgctgca 114
           ||||||||||||||||||||||
Sbjct: 112 tgggaatcttgatgatgctgca 133




>41401_ptc-MIR172g:mirbase
          Length = 143

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  tgggaatcttgatgatgctgca 114
           ||||||||||||||||||||||
Sbjct: 112 tgggaatcttgatgatgctgca 133




>40366_rco-MIR172:mirbase
          Length = 144

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 93  tgggaatcttgatgatgctgca 114
           ||||||||||||||||||||||
Sbjct: 117 tgggaatcttgatgatgctgca 138




>40324_bra-MIR172b:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgcagcaccattaagattcaca 33
          ||||||||||||||||||||||
Sbjct: 7  tgcagcaccattaagattcaca 28



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gaatcttgatgatgctgcatca 117
           ||||||||||||||||||||||
Sbjct: 83  gaatcttgatgatgctgcatca 104




>40323_bra-MIR172a:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gaatcttgatgatgctgcatca 117
           ||||||||||||||||||||||
Sbjct: 88  gaatcttgatgatgctgcatca 109




>40307_bol-MIR172b:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tgcagcaccattaagattcaca 33
          ||||||||||||||||||||||
Sbjct: 7  tgcagcaccattaagattcaca 28



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gaatcttgatgatgctgcatca 117
           ||||||||||||||||||||||
Sbjct: 83  gaatcttgatgatgctgcatca 104




>40306_bol-MIR172a:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gaatcttgatgatgctgcatca 117
           ||||||||||||||||||||||
Sbjct: 88  gaatcttgatgatgctgcatca 109




>40064_ath-MIR172b:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gaatcttgatgatgctgcatca 117
           ||||||||||||||||||||||
Sbjct: 72  gaatcttgatgatgctgcatca 93



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 gcagcaccattaagattcaca 33
          |||||||||||||||||||||
Sbjct: 5  gcagcaccattaagattcaca 25




>39853_aly-MIR172b:mirbase
          Length = 146

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gaatcttgatgatgctgcatca 117
           ||||||||||||||||||||||
Sbjct: 94  gaatcttgatgatgctgcatca 115




>39852_aly-MIR172a:mirbase
          Length = 149

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 96  gaatcttgatgatgctgcatcagcaa 121
           ||||||||||||||||||||| ||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125




>41990_osa-MIR172a:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  gaatcttgatgatgctgcatc 116
           |||||||||||||||||||||
Sbjct: 80  gaatcttgatgatgctgcatc 100




>41725_ata-MIR172:mirbase
          Length = 277

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  gaatcttgatgatgctgcatc 116
           |||||||||||||||||||||
Sbjct: 210 gaatcttgatgatgctgcatc 230




>41543_sly-MIR172b:mirbase
          Length = 135

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 91  agtgggaatcttgatgatgctgcat 115
           |||| ||||||||||||||||||||
Sbjct: 111 agtgagaatcttgatgatgctgcat 135




>41235_csi-MIR172c:mirbase
          Length = 163

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 95  ggaatcttgatgatgctgcatcagc 119
           |||||||||||||||||||| ||||
Sbjct: 120 ggaatcttgatgatgctgcagcagc 144




>41125_tcc-MIR172b:mirbase
          Length = 160

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  gaatcttgatgatgctgcatc 116
           |||||||||||||||||||||
Sbjct: 121 gaatcttgatgatgctgcatc 141




>40063_ath-MIR172a:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  gaatcttgatgatgctgcatc 116
           |||||||||||||||||||||
Sbjct: 79  gaatcttgatgatgctgcatc 99




>42778_zma-MIR172d:mirbase
          Length = 74

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 55  gaatcttgatgatgctgcat 74




>42777_zma-MIR172c:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 104 gaatcttgatgatgctgcat 123




>42776_zma-MIR172b:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 107 gaatcttgatgatgctgcat 126




>42775_zma-MIR172a:mirbase
          Length = 83

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 64  gaatcttgatgatgctgcat 83




>42560_sbi-MIR172d:mirbase
          Length = 88

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 69  gaatcttgatgatgctgcat 88




>42559_sbi-MIR172c:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 100 gaatcttgatgatgctgcat 119




>42557_sbi-MIR172a:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 83  gaatcttgatgatgctgcat 102




>41542_sly-MIR172a:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  gaatcttgatgatgctgcat 115
           ||||||||||||||||||||
Sbjct: 87  gaatcttgatgatgctgcat 106




>41233_csi-MIR172a:mirbase
          Length = 162

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  agtgggaatcttgatgatgctgca 114
           |||| |||||||||||||||||||
Sbjct: 111 agtgagaatcttgatgatgctgca 134