miRNEST 2.0, an integrative microRNA resource :: BLAST
>39858_aly-MIR319a:mirbase
Length = 221
Score = 333 bits (168), Expect = 3e-92
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 1 agagagagcttccttgagtccattcacaggtcgtgatatgattcaattagcttccgactc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 24 agagagagcttccttgagtccattcacaggtcgtgatatgatccaattagcttccgactc 83
Query: 61 attcatccaaataccgagtcgccaaaattcaaactagactcgttaaatgaatgaatgatg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 84 attcatccaaataccgagtcgccaaaattcgaactagactcgttaaatgaatgaatgatg 143
Query: 121 cggtagacaaattggatcattgattctctttgattggactgaagggagctccctct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cggtagacaaattggatcattgattctctttgattggactgaagggagctccctct 199
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 61.9 bits (31), Expect = 1e-10
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
||||||| |||||||||||| |||||||||||||| | || || || ||||||||||
Sbjct: 101 taaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactgaa 160
Query: 164 gggagctccct 174
|||||||||||
Sbjct: 161 gggagctccct 171
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 40 gattcaattagcttccgactcattcatccaaatac 74
|||| |||||||| |||||||||||||||||||||
Sbjct: 47 gattgaattagctgccgactcattcatccaaatac 81
>40070_ath-MIR319b:mirbase
Length = 172
Score = 61.9 bits (31), Expect = 1e-10
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
||||||||||||||||||| |||||||||| || | |||||| || ||||||||||
Sbjct: 102 taaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaa 161
Query: 164 gggagctccct 174
|||||||||||
Sbjct: 162 gggagctccct 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 cgactcattcatccaaatacc 75
|||||||||||||||||||||
Sbjct: 55 cgactcattcatccaaatacc 75
>39859_aly-MIR319b:mirbase
Length = 246
Score = 61.9 bits (31), Expect = 1e-10
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
||||||||||||||||||| |||||||||| || | |||||| || ||||||||||
Sbjct: 141 taaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaa 200
Query: 164 gggagctccct 174
|||||||||||
Sbjct: 201 gggagctccct 211
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 cgactcattcatccaaatacc 75
|||||||||||||||||||||
Sbjct: 94 cgactcattcatccaaatacc 114
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 58.0 bits (29), Expect = 2e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 3 agagagcttccttgagtccattcacaggtcgtgatatgattcaattagcttccgactcat 62
||||||||| ||| |||||| ||| ||| || || |||| |||||||| |||||||||
Sbjct: 10 agagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcat 69
Query: 63 tcatccaaataccgagt 79
|||||||||||| ||||
Sbjct: 70 tcatccaaatactgagt 86
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattg 134
||||||| |||||||||||| ||||||||||
Sbjct: 110 taaatgagtgaatgatgcgggagacaaattg 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 160 ttggactgaagggagctccct 180
>40464_gma-MIR319a:mirbase
Length = 207
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 40 gattcaattagcttccgactcattcatccaaat 72
||||||||||||| |||||||||||||||||||
Sbjct: 57 gattcaattagctgccgactcattcatccaaat 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 169 ttggactgaagggagctccct 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 107 atgaatgaatgatgcggtagacaaattg 134
|||| |||||||||||| ||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattg 149
>40367_rco-MIR319a:mirbase
Length = 211
Score = 58.0 bits (29), Expect = 2e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 3 agagagcttccttgagtccattcacaggtcgtgatatgattcaattagcttccgactcat 62
||||||||| ||| |||||| ||| ||| | | || |||| |||||||| |||||||||
Sbjct: 4 agagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcat 63
Query: 63 tcatccaaataccgagt 79
|||||||||||| ||||
Sbjct: 64 tcatccaaatactgagt 80
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattg 134
||||||| |||||||||||| ||||||||||
Sbjct: 136 taaatgagtgaatgatgcgggagacaaattg 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccct 206
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 56.0 bits (28), Expect = 9e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 36 atatgattcaattagcttccgactcattcatccaaataccgagt 79
|||||||| |||||| | ||||||||||||||||||||| ||||
Sbjct: 43 atatgatttaattagttaccgactcattcatccaaatactgagt 86
Score = 46.1 bits (23), Expect = 9e-06
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattggatcattgattctctttgattggactgaa 163
||||||||||| |||||||| ||||||||| ||| | | | || | |||||||||||
Sbjct: 107 taaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaa 166
Query: 164 gggagctccct 174
|||||||||||
Sbjct: 167 gggagctccct 177
>40465_gma-MIR319b:mirbase
Length = 208
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 42 ttcaattagcttccgactcattcatccaaat 72
||||||||||| |||||||||||||||||||
Sbjct: 60 ttcaattagctgccgactcattcatccaaat 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 aaatgaatgaatgatgcggtagacaaattg 134
|||||| |||||||||||| ||||||||||
Sbjct: 121 aaatgagtgaatgatgcgggagacaaattg 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctccct 190
>40703_mtr-MIR319:mirbase
Length = 207
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 147 tctttgattggactgaagggagctccct 174
|||||| |||||||||||||||||||||
Sbjct: 162 tctttgcttggactgaagggagctccct 189
>41544_sly-MIR319:mirbase
Length = 168
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 42 ttcaattagcttccgactcattcatccaaat 72
||||||| ||| |||||||||||||||||||
Sbjct: 36 ttcaatttgctgccgactcattcatccaaat 66
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 144 ttctctttgattggactgaagggagctccct 174
|||||| || |||||||||||||||||||||
Sbjct: 155 ttctctgtgcttggactgaagggagctccct 185
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 144 ttctctttgattggactgaagggagctccct 174
|||||| || |||||||||||||||||||||
Sbjct: 158 ttctctgtgcttggactgaagggagctccct 188
>41282_ctr-MIR319:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 40 gattcaattagcttccgactcattcatccaaatac 74
|||| |||||||| | |||||||||||||||||||
Sbjct: 44 gatttaattagctgctgactcattcatccaaatac 78
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 104 taaatgaatgaatgatgcggtagacaaattg 134
||||||| |||||||||||| ||||||||||
Sbjct: 107 taaatgagtgaatgatgcgggagacaaattg 137
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 42 ttcaattagcttccgactcattcatccaaat 72
||||||||||| | |||||||||||||||||
Sbjct: 43 ttcaattagctgctgactcattcatccaaat 73
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 aaatgaatgaatgatgcggtagacaaattg 134
|||||| |||||||||||| ||||||||||
Sbjct: 107 aaatgagtgaatgatgcgggagacaaattg 136
>40369_rco-MIR319c:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 144 ttctctttgattggactgaagggagctccct 174
|||||| || |||||||||||||||||||||
Sbjct: 153 ttctctgtgcttggactgaagggagctccct 183
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccctc 175
||||||||||||||||||||||
Sbjct: 184 ttggactgaagggagctccctc 205
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccctc 175
||||||||||||||||||||||
Sbjct: 226 ttggactgaagggagctccctc 247
>41185_aqc-MIR319:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 gattcaattagcttccgactcattcatcca 69
||||||||| ||| ||||||||||||||||
Sbjct: 38 gattcaatttgctgccgactcattcatcca 67
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccct 175
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccctc 175
||||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccctc 175
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 147 tctttgattggactgaagggagctccctc 175
|||||| ||||||||||||| ||||||||
Sbjct: 167 tctttgcttggactgaagggtgctccctc 195
>42781_zma-MIR319b:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 147 tctttgattggactgaagggagctccctc 175
|||||| ||||||||||||| ||||||||
Sbjct: 168 tctttgcttggactgaagggtgctccctc 196
>42563_sbi-MIR319:mirbase
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 147 tctttgattggactgaagggagctccctc 175
|||||| ||||||||||||| ||||||||
Sbjct: 184 tctttgcttggactgaagggtgctccctc 212
>41995_osa-MIR319b:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 147 tctttgattggactgaagggagctccctc 175
|||||| ||||||||||||| ||||||||
Sbjct: 161 tctttgcttggactgaagggtgctccctc 189
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 attggactgaagggagctccc 173
|||||||||||||||||||||
Sbjct: 191 attggactgaagggagctccc 211
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccct 182
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccct 183
>39740_smo-MIR319:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccct 174
|||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccct 206
>39424_pta-MIR319:mirbase
Length = 206
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 148 ctttgattggactgaagggagctcc 172
||||| |||||||||||||||||||
Sbjct: 178 ctttggttggactgaagggagctcc 202
>39417_pta-MIR159a:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 148 ctttgattggactgaagggagctcc 172
||||| |||||||||||||||||||
Sbjct: 33 ctttggttggactgaagggagctcc 9
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 attggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 164 attggactgaagggagctcc 183
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 attggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 163 attggactgaagggagctcc 182
>40370_rco-MIR319d:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 attggactgaagggagctcc 172
||||||||||||||||||||
Sbjct: 161 attggactgaagggagctcc 180
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccc 173
||||||||||||||||||||
Sbjct: 148 ttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccc 173
||||||||||||||||||||
Sbjct: 146 ttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 ttggactgaagggagctccc 173
||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccc 174
