miRNEST 2.0, an integrative microRNA resource :: BLAST
>39863_aly-MIR390b:mirbase
Length = 127
Score = 161 bits (81), Expect = 1e-40
Identities = 108/117 (92%)
Strand = Plus / Plus
Query: 4 aaatagctataaagctcaggagggatagcgccatggctcaccagtgctgtatgttttgta 63
||||||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||
Sbjct: 8 aaatagctataaagctcaggagggatagcgccatgaatcaccaatactgtaggttttgta 67
Query: 64 tatgcgtacatgtatatctgttggcgctatccatcctgagttccatagcttcttctt 120
||| | | |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tatacatgcatgtagatctgttggcgctatccatcctgagttccatagcttcttctt 124
>40292_bna-MIR390a:mirbase
Length = 144
Score = 65.9 bits (33), Expect = 6e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gagaaatagctataaagctcaggagggatagcgccatggctcacc 45
||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 19 gagaagtagctgtaaagctcaggagggatagcgccatgtctcacc 63
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 84 ttggcgctatccatcctgagttccatagcttcttctt 120
||||||||||||||||||||||| || ||||||||||
Sbjct: 92 ttggcgctatccatcctgagttctatggcttcttctt 128
>40294_bna-MIR390c:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 85 tggcgctatccatcctgagttccatagcttcttctt 120
||||||||||||||||||||||||| ||||||||||
Sbjct: 83 tggcgctatccatcctgagttccatggcttcttctt 118
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1 gagaaatagctataaagctcaggagggatagcgccatggctca 43
||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 9 gagaagtagctgtaaagctcaggagggatagcgccatgactca 51
>41237_csi-MIR390:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 85 tggcgctatccatcctgagttccatagcttcttctt 120
||||||||||||||||||||| ||| ||||||||||
Sbjct: 96 tggcgctatccatcctgagtttcatggcttcttctt 131
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||
Sbjct: 21 aagctcaggagggatagcgccatgg 45
>40468_gma-MIR390a:mirbase
Length = 105
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||||
Sbjct: 9 taaagctcaggagggatagcgccatgg 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 gcgctatccatcctgagttccatagcttct 116
||||||||||||||||||| ||| ||||||
Sbjct: 67 gcgctatccatcctgagtttcatggcttct 96
>40467_gma-MIR390a:mirbase
Length = 105
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||||
Sbjct: 9 taaagctcaggagggatagcgccatgg 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 87 gcgctatccatcctgagttccatagcttct 116
||||||||||||||||||| ||| ||||||
Sbjct: 67 gcgctatccatcctgagtttcatggcttct 96
>40072_ath-MIR390a:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagcgccatg 38
||||||||||||||||||||||||||
Sbjct: 16 taaagctcaggagggatagcgccatg 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ttggcgctatccatcctgagtt 105
||||||||||||||||||||||
Sbjct: 66 ttggcgctatccatcctgagtt 87
>39862_aly-MIR390a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagcgccatg 38
||||||||||||||||||||||||||
Sbjct: 27 taaagctcaggagggatagcgccatg 52
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ttggcgctatccatcctgagtt 105
||||||||||||||||||||||
Sbjct: 77 ttggcgctatccatcctgagtt 98
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagcgccat 37
|||||||||||||||||||||||||
Sbjct: 19 taaagctcaggagggatagcgccat 43
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatgg 35
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccatgg 42
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 87 gcgctatccatcctgagttccatagcttcttctt 120
||||||||||||||||||| ||| | ||||||||
Sbjct: 94 gcgctatccatcctgagtttcatcggttcttctt 127
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatgg 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 87 gcgctatccatcctgagttccatagcttcttctt 120
||||||||||||||||||| ||| | ||||||||
Sbjct: 91 gcgctatccatcctgagtttcatcggttcttctt 124
>40372_rco-MIR390b:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatgg 39
|||||||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgccatgg 30
>40293_bna-MIR390b:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagcgccat 37
|||||||||||||||||||||||||
Sbjct: 16 taaagctcaggagggatagcgccat 40
>41640_vvi-MIR390:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatg 38
||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatg 34
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatg 38
||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatg 34
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccatg 38
||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatg 34
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccat 37
|||||||||||||||||||||||
Sbjct: 21 aagctcaggagggatagcgccat 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 87 gcgctatccatcctgagttccatagcttcttctt 120
||||||||||||||||||| ||| | ||||||||
Sbjct: 88 gcgctatccatcctgagtttcatcggttcttctt 121
>40705_mtr-MIR390:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccat 37
|||||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgccat 28
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgccat 37
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 tggcgctatccatcctgagttccatagctt 114
||||||||||||||||||||| ||| ||||
Sbjct: 77 tggcgctatccatcctgagtttcattgctt 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tggcgctatccatcctgagtt 105
|||||||||||||||||||||
Sbjct: 77 tggcgctatccatcctgagtt 97
>40371_rco-MIR390a:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgcc 26
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tggcgctatccatcctgagtt 105
|||||||||||||||||||||
Sbjct: 80 tggcgctatccatcctgagtt 100
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 aagctcaggagggatagcgcc 35
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>40469_gma-MIR390b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 taaagctcaggagggatagc 32
||||||||||||||||||||
Sbjct: 9 taaagctcaggagggatagc 28
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 agctcaggagggatagcgcc 35
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
