miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46997_ath-miR391:pmrd
Length = 206
Score = 408 bits (206), Expect = e-115
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 1 tagagtgattacacatacaagtggtcttgcttcttctatggttttaaaactgcaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagagtgattacacatacaagtggtcttgcttcttctatggttttaaaactgcaaataaa 60
Query: 61 gatttgcttcgcaggagagatagcgccatcacctcttctaagaagttaactagtggtgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatttgcttcgcaggagagatagcgccatcacctcttctaagaagttaactagtggtgac 120
Query: 121 ggtatctctcctacgtagcaatccttatatatgcatcttaatacggagagatcaaggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtatctctcctacgtagcaatccttatatatgcatcttaatacggagagatcaaggtat 180
Query: 181 ttcagttgttcaataatcaccctcta 206
||||||||||||||||||||||||||
Sbjct: 181 ttcagttgttcaataatcaccctcta 206
>47413_ath-miRf10313-akr:pmrd
Length = 88
Score = 174 bits (88), Expect = 2e-44
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 59 aagatttgcttcgcaggagagatagcgccatcacctcttctaagaagttaactagtggtg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagatttgcttcgcaggagagatagcgccatcacctcttctaagaagttaactagtggtg 60
Query: 119 acggtatctctcctacgtagcaatcctt 146
||||||||||||||||||||||||||||
Sbjct: 61 acggtatctctcctacgtagcaatcctt 88
>48389_bol-miR391:pmrd
Length = 89
Score = 91.7 bits (46), Expect = 2e-19
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 66 gcttcgcaggagagatagcgccatcacctcttctaagaagttaactag-tggtgacggta 124
||||||||||||||||||||||||||| |||||| | |||| | || |||||||||||
Sbjct: 8 gcttcgcaggagagatagcgccatcacttcttcttaagagtttagaagatggtgacggta 67
Query: 125 tctctcctacgtagcaatcctt 146
||||||||||||||||||||||
Sbjct: 68 tctctcctacgtagcaatcctt 89
