miRNEST 2.0, an integrative microRNA resource :: BLAST
>39873_aly-MIR395f:mirbase
Length = 127
Score = 135 bits (68), Expect = 8e-33
Identities = 106/117 (90%), Gaps = 5/117 (4%)
Strand = Plus / Plus
Query: 1 atgtccccttgagttcccttaaacgcttcattgttcatactttgttatc----atctatc 56
||||| |||||||||||||||||||||| |||||||| |||||||| || ||| |||
Sbjct: 6 atgtctccttgagttcccttaaacgctttattgttcacactttgttgtctaagatcaatc 65
Query: 57 gatcgat-caatcaatctgatgaacactgaagtgtttggggggactctaggtgacat 112
||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 66 gatcgattcaatcaatctgacgaacactgaagtgtttggggggactctaggtgacat 122
>39875_aly-MIR395h:mirbase
Length = 135
Score = 131 bits (66), Expect = 1e-31
Identities = 107/123 (86%), Gaps = 12/123 (9%)
Strand = Plus / Plus
Query: 2 tgtccccttgagttcccttaaacgcttcattgttcatactttgt------------tatc 49
|||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7 tgtccccttgagttcccttaaacgcttcattgttcatactttgtgagtttgtgttctaag 66
Query: 50 atctatcgatcgatcaatcaatctgatgaacactgaagtgtttggggggactctaggtga 109
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atctatcgaccgataaatcaatctgatgaacactgaagtgtttggggggactctaggtga 126
Query: 110 cat 112
|||
Sbjct: 127 cat 129
>40081_ath-MIR395c:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 aacactgaagtgtttggggggactctaggtg 108
|||||||||||||||||||||||||| ||||
Sbjct: 66 aacactgaagtgtttggggggactcttggtg 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 atgtccccttgagttcccttaaacgcttcattgtt 35
|||||| | ||||||||||| ||||||||||||||
Sbjct: 1 atgtccacatgagttccctttaacgcttcattgtt 35
>40080_ath-MIR395b:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 atgtccccttgagttcccttaaacgcttcattgtt 35
|||||||| ||||||||||| ||||||||||||||
Sbjct: 1 atgtccccatgagttccctttaacgcttcattgtt 35
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 aacactgaagtgtttggggggactctaggtg 108
|||||||||||||||||||||||||| ||||
Sbjct: 66 aacactgaagtgtttggggggactcttggtg 96
>39869_aly-MIR395b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 atgtccccttgagttcccttaaacgcttcattgtt 35
|||||||| ||||||||||| ||||||||||||||
Sbjct: 6 atgtccccatgagttccctttaacgcttcattgtt 40
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 aacactgaagtgtttggggggactctaggtg 108
|||||||||||||||||||||||||| ||||
Sbjct: 71 aacactgaagtgtttggggggactcttggtg 101
>39870_aly-MIR395c:mirbase
Length = 166
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 aacactgaagtgtttggggggact 101
||||||||||||||||||||||||
Sbjct: 112 aacactgaagtgtttggggggact 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgagttcccttaaacgcttcattgtt 35
||||||||||| ||||||||||||||
Sbjct: 37 tgagttccctttaacgcttcattgtt 62
>40375_rco-MIR395b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 actgaagtgtttggggggactctaggt 107
||||||||||||||||| |||||||||
Sbjct: 71 actgaagtgtttgggggaactctaggt 97
>42010_osa-MIR395j:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 tgaagtgtttggggggactctaggtg 108
||||||||||||||| ||||||||||
Sbjct: 83 tgaagtgtttgggggaactctaggtg 108
>42008_osa-MIR395h:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 tgaagtgtttggggggactctaggtg 108
||||||||||||||| ||||||||||
Sbjct: 83 tgaagtgtttgggggaactctaggtg 108
>41429_ptc-MIR395e:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 80 cactgaagtgtttggggggactctaggtg 108
|||||||||||||||||| ||||| ||||
Sbjct: 82 cactgaagtgtttgggggaactctgggtg 110
>41240_csi-MIR395:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 80 cactgaagtgtttggggggactctaggtg 108
|||||||||||||||||| ||||| ||||
Sbjct: 69 cactgaagtgtttgggggaactctgggtg 97
>41430_ptc-MIR395f:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 cactgaagtgtttggggggactct 103
|||||||||||||||||| |||||
Sbjct: 82 cactgaagtgtttgggggaactct 105
>40377_rco-MIR395d:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 79 acactgaagtgtttggggggactc 102
||||||||||||||||||| ||||
Sbjct: 59 acactgaagtgtttgggggaactc 82
