miRNEST 2.0, an integrative microRNA resource :: BLAST
>39879_aly-MIR397a:mirbase
Length = 126
Score = 157 bits (79), Expect = 2e-39
Identities = 102/107 (95%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 1 tgaatgaacatcattgagtgcagcgttgatgtaatttcgttttgtttttcattgttgaat 60
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 10 tgaatgaacatcattgagtgcagcgttgatgtaatttcctttt-tttttcattgttgaat 68
Query: 61 gg-attaaaagaatttataccagcgttgcgctcaattatgtttttct 106
|| |||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 69 ggaattaaaagaatttacaccggcgttgcgctcaattatgtttttct 115
>40298_bna-MIR397b:mirbase
Length = 96
Score = 97.6 bits (49), Expect = 2e-21
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 6 gaacatcattgagtgcagcgttgatgtaatttcgttttgtttttcattgttgaatggatt 65
||||||||||||||||||||||||||| |||| || | |||||||||||||||||||||
Sbjct: 1 gaacatcattgagtgcagcgttgatgtgatttacttatctttttcattgttgaatggatt 60
Query: 66 aaaagaatttataccagcgttgcgctcaattatgttt 102
||| |||||| | || ||||| ||||||||||||||
Sbjct: 61 aaagcaatttacatcaacgttg-gctcaattatgttt 96
>40297_bna-MIR397a:mirbase
Length = 96
Score = 97.6 bits (49), Expect = 2e-21
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 6 gaacatcattgagtgcagcgttgatgtaatttcgttttgtttttcattgttgaatggatt 65
||||||||||||||||||||||||||| |||| || | |||||||||||||||||||||
Sbjct: 1 gaacatcattgagtgcagcgttgatgtgatttacttctctttttcattgttgaatggatt 60
Query: 66 aaaagaatttataccagcgttgcgctcaattatgttt 102
||| |||||| | || ||||| ||||||||||||||
Sbjct: 61 aaagcaatttacatcaacgttg-gctcaattatgttt 96
>40088_ath-MIR397b:mirbase
Length = 109
Score = 75.8 bits (38), Expect = 6e-15
Identities = 92/109 (84%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 1 tgaatgaacatcattgagtgcagcgttgatgtaattt--cgttttgtttttcattgttga 58
|||||||||||||||||||||| |||||||||||||| | | || | || |||||||||
Sbjct: 1 tgaatgaacatcattgagtgcatcgttgatgtaattttacttattttattccattgttga 60
Query: 59 atggattaaaagaatttataccagcgttgcgctcaattatgtttttcta 107
|| |||||| | | |||| ||||||||| |||||||||||||||||
Sbjct: 61 attaattaaagaagtatatatcagcgttgcattcaattatgtttttcta 109
>39880_aly-MIR397b:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tgaatgaacatcattgagtgcagcgttgatgtaa 34
||||| ||||||||||||||||||||||||||||
Sbjct: 9 tgaataaacatcattgagtgcagcgttgatgtaa 42
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcagcgttgatg 31
|||||||||||||||||||||||||
Sbjct: 7 aacatcattgagtgcagcgttgatg 31
>41244_csi-MIR397:mirbase
Length = 156
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcagcgttgatg 31
|||||||||||||||||||||||||
Sbjct: 14 aacatcattgagtgcagcgttgatg 38
>40380_rco-MIR397:mirbase
Length = 157
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcagcgttgatg 31
|||||||||||||||||||||||||
Sbjct: 2 aacatcattgagtgcagcgttgatg 26
>41143_tcc-MIR397:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 acatcattgagtgcagcgttgatg 31
||||||||||||||||||||||||
Sbjct: 18 acatcattgagtgcagcgttgatg 41
>42037_osa-MIR397a:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 catcattgagtgcagcgttgatg 31
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 catcattgagtgcagcgttgatg 31
|||||||||||||||||||||||
Sbjct: 30 catcattgagtgcagcgttgatg 52
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 catcattgagtgcagcgttgatg 31
|||||||||||||||||||||||
Sbjct: 176 catcattgagtgcagcgttgatg 198
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 catcattgagtgcagcgttgatg 31
|||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatg 38
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 catcattgagtgcagcgttgatg 31
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>39382_pab-MIR397:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 acatcattgagtgcagcgttga 29
||||||||||||||||||||||
Sbjct: 14 acatcattgagtgcagcgttga 35
>42587_sbi-MIR397:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tcattgagtgcagcgttgatg 31
|||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatg 21
>41547_sly-MIR397:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcagcgttgatg 31
||||| |||||||||||||||||||
Sbjct: 14 aacatgattgagtgcagcgttgatg 38
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 cattgagtgcagcgttgatgtaatt 36
|||||||||||||||||||| ||||
Sbjct: 12 cattgagtgcagcgttgatgaaatt 36
