miRNEST 2.0, an integrative microRNA resource :: BLAST
>39880_aly-MIR397b:mirbase
Length = 131
Score = 129 bits (65), Expect = 5e-31
Identities = 103/114 (90%), Gaps = 5/114 (4%)
Strand = Plus / Plus
Query: 1 tgaatgaacatcattgagtgcatcgttgatgtaattttacttattttattccattgttga 60
||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 9 tgaataaacatcattgagtgcagcgttgatgtaagtttacttattttattccattgttga 68
Query: 61 attaattaaa--ga---agtatatatcagcgttgcattcaattatgtttttcta 109
|| ||||||| || || ||| ||||||||||||||||||||||||||||||
Sbjct: 69 atgaattaaaatgatacagaatacatcagcgttgcattcaattatgtttttcta 122
>40087_ath-MIR397a:mirbase
Length = 107
Score = 75.8 bits (38), Expect = 6e-15
Identities = 92/109 (84%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 1 tgaatgaacatcattgagtgcatcgttgatgtaattttacttattttattccattgttga 60
|||||||||||||||||||||| |||||||||||||| | | || | || |||||||||
Sbjct: 1 tgaatgaacatcattgagtgcagcgttgatgtaattt--cgttttgtttttcattgttga 58
Query: 61 attaattaaagaagtatatatcagcgttgcattcaattatgtttttcta 109
|| |||||| | | |||| ||||||||| |||||||||||||||||
Sbjct: 59 atggattaaaagaatttataccagcgttgcgctcaattatgtttttcta 107
>39879_aly-MIR397a:mirbase
Length = 126
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 tgaatgaacatcattgagtgcatcgttgatgtaattt 37
|||||||||||||||||||||| ||||||||||||||
Sbjct: 10 tgaatgaacatcattgagtgcagcgttgatgtaattt 46
>40298_bna-MIR397b:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 9e-08
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 6 gaacatcattgagtgcatcgttgatgtaattttacttattttattccattgttgaattaa 65
||||||||||||||||| ||||||||| | ||||||||| || || ||||||||||| |
Sbjct: 1 gaacatcattgagtgcagcgttgatgtga-tttacttatctt-tttcattgttgaatgga 58
Query: 66 ttaaag 71
||||||
Sbjct: 59 ttaaag 64
>40297_bna-MIR397a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 6 gaacatcattgagtgcatcgttgatgtaattt 37
||||||||||||||||| ||||||||| ||||
Sbjct: 1 gaacatcattgagtgcagcgttgatgtgattt 32
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcatcgttgatg 31
|||||||||||||||| ||||||||
Sbjct: 7 aacatcattgagtgcagcgttgatg 31
>41244_csi-MIR397:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcatcgttgatg 31
|||||||||||||||| ||||||||
Sbjct: 14 aacatcattgagtgcagcgttgatg 38
>40380_rco-MIR397:mirbase
Length = 157
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 aacatcattgagtgcatcgttgatg 31
|||||||||||||||| ||||||||
Sbjct: 2 aacatcattgagtgcagcgttgatg 26
>41143_tcc-MIR397:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 acatcattgagtgcatcgttgatg 31
||||||||||||||| ||||||||
Sbjct: 18 acatcattgagtgcagcgttgatg 41
