miRNEST 2.0, an integrative microRNA resource :: BLAST
>39881_aly-MIR398a:mirbase
Length = 182
Score = 137 bits (69), Expect = 2e-33
Identities = 97/105 (92%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 1 tgaaatttcaaaggagtggcatgtgaacacatatcctatggtttcttcaaatttccattg 60
|||||| ||||||||||| |||| ||||||| ||||||||||||||| | |||| |||||
Sbjct: 49 tgaaatctcaaaggagtgtcatgagaacacagatcctatggtttctttacattttcattg 108
Query: 61 aaaccattgagttttgtgttctcaggtcacccctttgaatctccc 105
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 109 aaaccattgag-tttgtgttctcaggtcacccctttgaatctccc 152
>40308_bol-MIR398a:mirbase
Length = 95
Score = 97.6 bits (49), Expect = 2e-21
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 8 tcaaaggagtggcatgtgaacacatatcctatggtttcttcaa-atttccattgaaacca 66
||||||||||| |||| |||||| ||||| | ||||||| || ||||||| ||||||||
Sbjct: 3 tcaaaggagtgtcatgagaacacggatcctcttgtttctttaagatttccactgaaacca 62
Query: 67 ttgagttttgtgttctcaggtcacccctttgaa 99
|||||| ||||||||||||||||||||||||||
Sbjct: 63 ttgagtattgtgttctcaggtcacccctttgaa 95
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 72 ttttgtgttctcaggtcacccctttga 98
|||||||||||||||||||||||||||
Sbjct: 70 ttttgtgttctcaggtcacccctttga 96
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 ttttgtgttctcaggtcacccctttg 97
||||||||||||||||||||||||||
Sbjct: 70 ttttgtgttctcaggtcacccctttg 95
>40479_gma-MIR398b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 tttgtgttctcaggtcacccctttga 98
||||||||||||||||||||||||||
Sbjct: 94 tttgtgttctcaggtcacccctttga 119
>40478_gma-MIR398a:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 tttgtgttctcaggtcacccctttga 98
||||||||||||||||||||||||||
Sbjct: 75 tttgtgttctcaggtcacccctttga 100
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 tttgtgttctcaggtcacccctttg 97
|||||||||||||||||||||||||
Sbjct: 64 tttgtgttctcaggtcacccctttg 88
>40403_ahy-MIR398:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 ttgtgttctcaggtcacccctttga 98
|||||||||||||||||||||||||
Sbjct: 128 ttgtgttctcaggtcacccctttga 152
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 ttgtgttctcaggtcacccctttg 97
||||||||||||||||||||||||
Sbjct: 100 ttgtgttctcaggtcacccctttg 123
>41245_csi-MIR398:mirbase
Length = 225
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 ttgtgttctcaggtcacccctttg 97
||||||||||||||||||||||||
Sbjct: 131 ttgtgttctcaggtcacccctttg 154
>41078_gra-MIR398:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 ttgtgttctcaggtcacccctttg 97
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>41059_ghr-MIR398:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 ttgtgttctcaggtcacccctttg 97
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>42039_osa-MIR398a:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgtgttctcaggtcacccctttg 97
|||||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccctttg 107
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgtgttctcaggtcacccctttg 97
|||||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccctttg 102
>40381_rco-MIR398a:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgtgttctcaggtcacccctttg 97
|||||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccctttg 88
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttgtgttctcaggtcacccctt 95
||||||||||||||||||||||
Sbjct: 124 ttgtgttctcaggtcacccctt 145
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgtgttctcaggtcacccct 94
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgtgttctcaggtcacccct 94
||||||||||||||||||||
Sbjct: 86 tgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 tgtgttctcaggtcacccct 94
||||||||||||||||||||
Sbjct: 91 tgtgttctcaggtcacccct 110
