miRNEST 2.0, an integrative microRNA resource :: BLAST
>40091_ath-MIR398c:mirbase
Length = 115
Score = 190 bits (96), Expect = 2e-49
Identities = 112/116 (96%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 tggatctcgacagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctac 60
||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 1 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 60
Query: 61 gtcattgttacagctctcgttttcatgtgttctcaggtcacccctgctgagctctt 116
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcattgttacagctctcg-tttcatgtgttctcaggtcacccctgctgagctctt 115
>39883_aly-MIR398c:mirbase
Length = 132
Score = 135 bits (68), Expect = 8e-33
Identities = 108/119 (90%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 1 tggatctcgacagggttgatatgagaacacacgagtaatcaacggctgt-aatgacgcta 59
|||||||||||||||| || ||||||||| | ||| ||||||||||||| ||||||||||
Sbjct: 6 tggatctcgacagggtcgacatgagaacatatgagcaatcaacggctgtaaatgacgcta 65
Query: 60 cgtcattgttacagctctcgttttcatgtgtt--ctcaggtcacccctgctgagctctt 116
||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 66 cgtcattattacatctctcggtttcatgtgttaactcaggtcacccctgctgagctctt 124
>39882_aly-MIR398b:mirbase
Length = 142
Score = 111 bits (56), Expect = 1e-25
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1 tggatctcgacagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctac 60
||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||
Sbjct: 19 tggatctcgacagggttgatatgaggacacatgtgtaatcaacggctgtaatgacgccac 78
Query: 61 gtcattgttaca 72
||||||||||||
Sbjct: 79 gtcattgttaca 90
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 83 tcatgtgttctcaggtcacccctgctga 110
||||||||||||||||| ||||||||||
Sbjct: 59 tcatgtgttctcaggtcgcccctgctga 86
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 tcatgtgttctcaggtcacccctgctg 109
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 tcatgtgttctcaggtcacccctgctg 109
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>40382_rco-MIR398b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 tttcatgtgttctcaggtcacccctgc 107
||||||||||||||||||| |||||||
Sbjct: 96 tttcatgtgttctcaggtcgcccctgc 122
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 ttcatgtgttctcaggtcacccctgc 107
|||||||||||||||||| |||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctgc 77
>41144_tcc-MIR398a:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 79 gttttcatgtgttctcaggtcacccctgc 107
||||| ||||||||||||||| |||||||
Sbjct: 78 gttttgatgtgttctcaggtcgcccctgc 106
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccctgctga 110
|||||||||||||| ||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgctga 86
>42039_osa-MIR398a:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 101 tgtgttctcaggtcacccct 120
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 catgtgttctcaggtcacccctgc 107
|||||||||||||||| |||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccct 99
>41245_csi-MIR398:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 132 tgtgttctcaggtcacccct 151
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 catgtgttctcaggtcacccctgc 107
|||||||||||||||| |||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 125 tgtgttctcaggtcacccct 144
>41078_gra-MIR398:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41059_ghr-MIR398:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>40479_gma-MIR398b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 96 tgtgttctcaggtcacccct 115
>40478_gma-MIR398a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>40403_ahy-MIR398:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 129 tgtgttctcaggtcacccct 148
>40381_rco-MIR398a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40308_bol-MIR398a:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>40089_ath-MIR398a:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>39881_aly-MIR398a:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 tgtgttctcaggtcacccct 105
||||||||||||||||||||
Sbjct: 122 tgtgttctcaggtcacccct 141
