miRNEST 2.0, an integrative microRNA resource :: BLAST
>39884_aly-MIR399a:mirbase
Length = 162
Score = 192 bits (97), Expect = 4e-50
Identities = 117/123 (95%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 1 aaatgcattacagggtaagatctctattggcaggaaaccattacttagatctttgcatct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 aaatgtattacagggtaagatctctattggcaggaaaccattacttagatctttgcatct 83
Query: 61 ctttatgcattgcttttaattagtgagttatctgccaaaggagatttgccctgtaattct 120
|||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||
Sbjct: 84 ctttatgcattgctttta---agtgagttctctgccaaaggagatttgcccggtaattct 140
Query: 121 tct 123
|||
Sbjct: 141 tct 143
>39893_aly-MIR399j:mirbase
Length = 136
Score = 141 bits (71), Expect = 1e-34
Identities = 111/121 (91%), Gaps = 5/121 (4%)
Strand = Plus / Plus
Query: 1 aaatgcattacagggtaagatctctattggcaggaaaccattacttagatctttgcatct 60
||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 9 aaatgcattacagggcaagatctctattggcaggaaaccattactt-gacctttgcatct 67
Query: 61 ctttatgcattgcttttaattagtgagttatctgccaaaggagatttgccctgtaattct 120
|||||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||
Sbjct: 68 ctttatgcattgcttt---gtagtgagttct-tgccaaaggagatttgcccggtaattct 123
Query: 121 t 121
|
Sbjct: 124 t 124
>40299_bna-MIR399:mirbase
Length = 102
Score = 127 bits (64), Expect = 2e-30
Identities = 93/102 (91%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 10 acagggtaagatctctattggcaggaaaccattacttagatctttgcatctctttatgca 69
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 acagggcaagatctctattggcagaaaaccattacttagatctttgcatctctttctgca 60
Query: 70 ttgcttttaattagtgagttatctgccaaaggagatttgccc 111
||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 61 ttgattt---gtagtgagttctctgccaaaggagatttgccc 99
>39891_aly-MIR399h:mirbase
Length = 106
Score = 121 bits (61), Expect = 1e-28
Identities = 101/111 (90%), Gaps = 5/111 (4%)
Strand = Plus / Plus
Query: 7 attacagggtaagatctctattggcaggaaaccattacttagatctttgcatctctttat 66
||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1 attacagggcaagatctctattggcaggaaaccattactt-gacctttgcatctctttat 59
Query: 67 gcattgcttttaattagtgagttatctgccaaaggagatttgccctgtaat 117
|||||||||| ||||||||| | ||||||||||||||||||| |||||
Sbjct: 60 gcattgcttt---gtagtgagttct-tgccaaaggagatttgcccggtaat 106
>39889_aly-MIR399f:mirbase
Length = 167
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaattct 120
||||||||||||||||||||||||||||||
Sbjct: 110 tctgccaaaggagatttgccctgtaattct 139
>40097_ath-MIR399f:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaattct 120
||||||||||||||||||||| ||||||||
Sbjct: 86 tctgccaaaggagatttgcccggtaattct 115
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaattcttct 123
||||||||||||||||||||| | |||||||||
Sbjct: 80 tctgccaaaggagatttgcccggcaattcttct 112
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaattcttc 122
||||||||||||||||||||| | ||||||||
Sbjct: 94 tctgccaaaggagatttgcccggcaattcttc 125
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 80 ttagtgagttatctgccaaaggagatttgccc 111
|||||| || ||||||||||||||||||||||
Sbjct: 82 ttagtgtgtaatctgccaaaggagatttgccc 113
>42047_osa-MIR399g:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 tatctgccaaaggagatttgccc 111
|||||||||||||||||||||||
Sbjct: 85 tatctgccaaaggagatttgccc 107
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 95 ccaaaggagatttgccctgtaat 117
|||||||||||||||||||||||
Sbjct: 39 ccaaaggagatttgccctgtaat 17
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccc 95
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaattctt 121
||||||||||||||||||||| | |||||||
Sbjct: 93 tctgccaaaggagatttgcccggcaattctt 123
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaa 116
|||||||||||||| |||||||||||
Sbjct: 83 tctgccaaaggagagttgccctgtaa 108
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaa 116
|||||||||||||| |||||||||||
Sbjct: 80 tctgccaaaggagagttgccctgtaa 105
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tgccaaaggagatttgccctgtaattcttc 122
||||||||||||||||||| | ||||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattcttc 126
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 93 tgccaaaggagatttgccctgtaattcttc 122
||||||||||||||||||| | ||||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattcttc 126
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 atctgccaaaggagatttgccc 111
||||||||||||||||||||||
Sbjct: 76 atctgccaaaggagatttgccc 97
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 atctgccaaaggagatttgccc 111
||||||||||||||||||||||
Sbjct: 92 atctgccaaaggagatttgccc 113
>40388_rco-MIR399f:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 ttatctgccaaaggagatttgc 109
||||||||||||||||||||||
Sbjct: 57 ttatctgccaaaggagatttgc 78
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccc 111
|||||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgccc 99
>42046_osa-MIR399f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccc 111
|||||||||||||||||||||
Sbjct: 85 tctgccaaaggagatttgccc 105
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 90 atctgccaaaggagatttgccctgt 114
||||||||||||||| |||||||||
Sbjct: 49 atctgccaaaggagagttgccctgt 73
>41668_vvi-MIR399a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccctgtaattc 119
|||||||||||||| ||||||||| ||||
Sbjct: 65 tctgccaaaggagaattgccctgttattc 93
>41246_csi-MIR399a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccc 111
|||||||||||||||||||||
Sbjct: 112 tctgccaaaggagatttgccc 132
>41192_aqc-MIR399:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 88 ttatctgccaaaggagatttgccct 112
||||||||||||||||| |||||||
Sbjct: 67 ttatctgccaaaggagagttgccct 91
>41150_tcc-MIR399e:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 91 tctgccaaaggagatttgccctgtaattcttct 123
|||||||||||||| |||| |||| ||||||||
Sbjct: 41 tctgccaaaggagaattgcgctgttattcttct 9
>41063_ghr-MIR399d:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tgccaaaggagatttgccctg 113
|||||||||||||||||||||
Sbjct: 67 tgccaaaggagatttgccctg 87
>40739_mtr-MIR399i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tgccaaaggagatttgccctg 113
|||||||||||||||||||||
Sbjct: 65 tgccaaaggagatttgccctg 85
>40738_mtr-MIR399h:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tgccaaaggagatttgccctg 113
|||||||||||||||||||||
Sbjct: 65 tgccaaaggagatttgccctg 85
>40733_mtr-MIR399c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tgccaaaggagatttgccctg 113
|||||||||||||||||||||
Sbjct: 80 tgccaaaggagatttgccctg 100
>40387_rco-MIR399e:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccc 111
|||||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgccc 101
>40095_ath-MIR399d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccc 111
|||||||||||||||||||||
Sbjct: 68 tctgccaaaggagatttgccc 88
>39887_aly-MIR399d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgccc 111
|||||||||||||||||||||
Sbjct: 82 tctgccaaaggagatttgccc 102
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgccc 105
>42045_osa-MIR399e:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgccc 106
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41673_vvi-MIR399f:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccctgtaattcttct 123
||||| ||||||||||| |||| |||||||||
Sbjct: 75 ctgccgaaggagatttgtcctgcaattcttct 106
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgccc 97
>40384_rco-MIR399b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>40096_ath-MIR399e:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgcc 110
||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcc 96
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 92 ctgccaaaggagatttgccc 111
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
>39888_aly-MIR399e:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tctgccaaaggagatttgcc 110
||||||||||||||||||||
Sbjct: 116 tctgccaaaggagatttgcc 135
