miRNEST 2.0, an integrative microRNA resource :: BLAST
>39885_aly-MIR399b:mirbase
Length = 154
Score = 178 bits (90), Expect = 7e-46
Identities = 123/135 (91%), Gaps = 8/135 (5%)
Strand = Plus / Plus
Query: 1 tcactagttttagggcgcctctccattggcaggtcctttacttccaaatatacacataca 60
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 10 tcacaagttttagggcgcctctccattggcaggtcctttatttccaaatatacacataca 69
Query: 61 tatatgaatatcgaaaatttccgatgatcgatttataaatgacctgccaaaggagagttg 120
||||||||||| ||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 70 tatatgaatatagaaaatt--------tcgatttatatatgacctgccaaaggagagttg 121
Query: 121 ccctgaaactggttc 135
|||||||||||||||
Sbjct: 122 ccctgaaactggttc 136
>41247_csi-MIR399b:mirbase
Length = 168
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 98 aatgacctgccaaaggagagttgccct 124
|||||||||||||||||||||||||||
Sbjct: 118 aatgacctgccaaaggagagttgccct 144
>42050_osa-MIR399j:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 104 ctgccaaaggagagttgccctgaaactgg 132
||||||||||||||||||||| |||||||
Sbjct: 75 ctgccaaaggagagttgccctaaaactgg 103
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 98 aatgacctgccaaaggagagttgccctg 125
||||||| ||||||||||||||||||||
Sbjct: 85 aatgacccgccaaaggagagttgccctg 112
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 98 aatgacctgccaaaggagagttgccctg 125
||||| ||||||||||||||||||||||
Sbjct: 45 aatgatctgccaaaggagagttgccctg 72
>42828_zma-MIR399j:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 cctgccaaaggagagttgccctg 125
|||||||||||||||||||||||
Sbjct: 152 cctgccaaaggagagttgccctg 174
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 cctgccaaaggagagttgccctg 125
|||||||||||||||||||||||
Sbjct: 164 cctgccaaaggagagttgccctg 186
>42044_osa-MIR399d:mirbase
Length = 286
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 cctgccaaaggagagttgccctg 125
|||||||||||||||||||||||
Sbjct: 254 cctgccaaaggagagttgccctg 276
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 ctgccaaaggagagttgccctg 125
||||||||||||||||||||||
Sbjct: 84 ctgccaaaggagagttgccctg 105
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 ctgccaaaggagagttgccctg 125
||||||||||||||||||||||
Sbjct: 81 ctgccaaaggagagttgccctg 102
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 100 tgacctgccaaaggagagttgccctg 125
|||| |||||||||||||||||||||
Sbjct: 82 tgacttgccaaaggagagttgccctg 107
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 gccaaaggagagttgccctgaaactg 131
|||||||||||||||||||| |||||
Sbjct: 97 gccaaaggagagttgccctgtaactg 122
>42827_zma-MIR399i:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccctg 90
>41249_csi-MIR399d:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccctg 120
>41192_aqc-MIR399:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 ctgccaaaggagagttgccct 124
|||||||||||||||||||||
Sbjct: 71 ctgccaaaggagagttgccct 91
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 117 tgccaaaggagagttgccctg 137
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 89 tgccaaaggagagttgccctg 109
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 54 tgccaaaggagagttgccctg 74
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 54 tgccaaaggagagttgccctg 74
>40383_rco-MIR399a:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 68 tgccaaaggagagttgccctg 88
>40094_ath-MIR399c:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 84 tgccaaaggagagttgccctg 104
>39886_aly-MIR399c:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccctg 125
|||||||||||||||||||||
Sbjct: 89 tgccaaaggagagttgccctg 109
>41548_sly-MIR399:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccct 124
||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccct 70
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tgccaaaggagagttgccct 124
||||||||||||||||||||
Sbjct: 79 tgccaaaggagagttgccct 98