miRNEST 2.0, an integrative microRNA resource :: BLAST
>39886_aly-MIR399c:mirbase
Length = 125
Score = 194 bits (98), Expect = 1e-50
Identities = 110/114 (96%)
Strand = Plus / Plus
Query: 1 ggagcagtaatagggcatctttctattggcaggcgacttggctatttgtatcttttgtgt 60
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 6 ggagcagtaatagggcatctttctattggcaggagactcggctatttgtatcttttgtgt 65
Query: 61 tcttgactattggctatgtcacttgccaaaggagagttgccctgtcactgcttc 114
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 tcttggctattggctatgtcacttgccaaaggagagttgccctgtcactacttc 119
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 61.9 bits (31), Expect = 9e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 76 atgtcacttgccaaaggagagttgccctgtcactgcttc 114
|||| ||||||||||||||||||||||||| ||||||||
Sbjct: 79 atgtgacttgccaaaggagagttgccctgtgactgcttc 117
>41249_csi-MIR399d:mirbase
Length = 130
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctgtcactgcttc 114
|||||||||||||||||||||| ||||||||
Sbjct: 100 tgccaaaggagagttgccctgtgactgcttc 130
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 acttgccaaaggagagttgccctgt 105
|||||||||||||||||||||||||
Sbjct: 114 acttgccaaaggagagttgccctgt 138
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 acttgccaaaggagagttgccctgt 105
|||||||||||||||||||||||||
Sbjct: 51 acttgccaaaggagagttgccctgt 75
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 acttgccaaaggagagttgccctgt 105
|||||||||||||||||||||||||
Sbjct: 51 acttgccaaaggagagttgccctgt 75
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 cttgccaaaggagagttgccctgt 105
||||||||||||||||||||||||
Sbjct: 87 cttgccaaaggagagttgccctgt 110
>40383_rco-MIR399a:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 cttgccaaaggagagttgccctgt 105
||||||||||||||||||||||||
Sbjct: 66 cttgccaaaggagagttgccctgt 89
>41247_csi-MIR399b:mirbase
Length = 168
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctgtcactgcttc 114
|||||||||||||||||||| | ||||||||
Sbjct: 125 tgccaaaggagagttgccctataactgcttc 155
>40732_mtr-MIR399b:mirbase
Length = 112
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 79 tcacttgccaaaggagagttgccctgt 105
|||||||||||||||||| ||||||||
Sbjct: 68 tcacttgccaaaggagagctgccctgt 94
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctgt 105
||||||||||||||||||||||
Sbjct: 85 tgccaaaggagagttgccctgt 106
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctgt 105
||||||||||||||||||||||
Sbjct: 82 tgccaaaggagagttgccctgt 103
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 gccaaaggagagttgccctgtcactgcttc 114
||||||||||||||||||||| ||| ||||
Sbjct: 93 gccaaaggagagttgccctgtgactacttc 122
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctgt 105
||||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccctgt 73
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 cttgccaaaggagagttgccct 103
||||||||||||||||||||||
Sbjct: 77 cttgccaaaggagagttgccct 98
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 85 gccaaaggagagttgccctgtcactg 110
||||||||||||||||||||| ||||
Sbjct: 97 gccaaaggagagttgccctgtaactg 122
>40745_mtr-MIR399o:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 tcacttgccaaaggagagttgccctg 104
|||||||||||||||||| |||||||
Sbjct: 62 tcacttgccaaaggagagctgccctg 87
>42828_zma-MIR399j:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctg 104
|||||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccctg 174
>42827_zma-MIR399i:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctg 104
|||||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccctg 90
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctg 104
|||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccctg 186
>42044_osa-MIR399d:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctg 104
|||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccctg 276
>40744_mtr-MIR399n:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 tcacttgccaaaggagagttgccct 103
|||||||||||||||||| ||||||
Sbjct: 70 tcacttgccaaaggagagctgccct 94
>40743_mtr-MIR399m:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 tcacttgccaaaggagagttgccct 103
|||||||||||||||||| ||||||
Sbjct: 55 tcacttgccaaaggagagctgccct 79
>40734_mtr-MIR399d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 tcacttgccaaaggagagttgccct 103
|||||||||||||||||| ||||||
Sbjct: 85 tcacttgccaaaggagagctgccct 109
>40093_ath-MIR399b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctg 104
|||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccctg 125
>39885_aly-MIR399b:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccctg 104
|||||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccctg 126
>42050_osa-MIR399j:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccct 103
||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccct 95
>41548_sly-MIR399:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccct 103
||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccct 70
>41455_ptc-MIR399h:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 cttgccaaaggagagttgccctgt 105
||||||||||||||||| ||||||
Sbjct: 101 cttgccaaaggagagtttccctgt 124
>41192_aqc-MIR399:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 tgccaaaggagagttgccct 103
||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccct 91
>40386_rco-MIR399d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 cttgccaaaggagagttgccctgt 105
||||||||||||||| ||||||||
Sbjct: 76 cttgccaaaggagagctgccctgt 99
