miRNEST 2.0, an integrative microRNA resource :: BLAST
>39889_aly-MIR399f:mirbase
Length = 167
Score = 192 bits (97), Expect = 4e-50
Identities = 109/113 (96%)
Strand = Plus / Plus
Query: 6 cattacagggcaagatcaccattggcagagatctattacttcattcttgcatcatatgca 65
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 30 cattacagggcaagatcaccattggcagaaatctattacttcattcttgcataatatgca 89
Query: 66 taaatgtttgtggtgagctctctgccaaaggagatttgcccggtaattctctt 118
| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 90 ttaatgtttgtggtgagctctctgccaaaggagatttgccctgtaattctctt 142
>39884_aly-MIR399a:mirbase
Length = 162
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 78 gtgagctctctgccaaaggagatttgcccggtaattct 115
||||| ||||||||||||||||||||||||||||||||
Sbjct: 103 gtgagttctctgccaaaggagatttgcccggtaattct 140
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 74 tgtggtgagctctctgccaaaggagatttgcccggtaattct 115
||||||| || |||||||||||||||||||||||| ||||||
Sbjct: 81 tgtggtgtgccctctgccaaaggagatttgcccggcaattct 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagatcaccattggcag 33
|||||||||||||||||| ||||||||||
Sbjct: 14 tgcattacagggcaagatttccattggcag 43
>40299_bna-MIR399:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 72 tttgtggtgagctctctgccaaaggagatttgcccggt 109
||||| ||||| ||||||||||||||||||||||||||
Sbjct: 65 tttgtagtgagttctctgccaaaggagatttgcccggt 102
>39893_aly-MIR399j:mirbase
Length = 136
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 88 tgccaaaggagatttgcccggtaattct 115
||||||||||||||||||||||||||||
Sbjct: 96 tgccaaaggagatttgcccggtaattct 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 atgcattacagggcaagatcaccattggcag 33
|||||||||||||||||||| | ||||||||
Sbjct: 11 atgcattacagggcaagatctctattggcag 41
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 85 ctctgccaaaggagatttgcccggtaattct 115
|||||||||||||||||||||||| ||||||
Sbjct: 79 ctctgccaaaggagatttgcccggcaattct 109
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgcccggtaattct 115
||||||||||||||||||||||| ||||||
Sbjct: 94 tctgccaaaggagatttgcccggcaattct 123
>40092_ath-MIR399a:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgcccggtaattct 115
||||||||||||||||||||| ||||||||
Sbjct: 91 tctgccaaaggagatttgccctgtaattct 120
>41246_csi-MIR399a:mirbase
Length = 155
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgcccggtaattc 114
||||||||||||||||||||||| |||||
Sbjct: 112 tctgccaaaggagatttgcccggcaattc 140
>39891_aly-MIR399h:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 tgccaaaggagatttgcccggtaat 112
|||||||||||||||||||||||||
Sbjct: 82 tgccaaaggagatttgcccggtaat 106
>42046_osa-MIR399f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 ctctctgccaaaggagatttgccc 106
||||||||||||||||||||||||
Sbjct: 82 ctctctgccaaaggagatttgccc 105
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 tgccaaaggagatttgcccggtaattct 115
||||||||||||||||||||| ||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattct 124
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 tgccaaaggagatttgcccggtaattct 115
||||||||||||||||||||| ||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattct 124
>40095_ath-MIR399d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 tctctgccaaaggagatttgccc 106
|||||||||||||||||||||||
Sbjct: 66 tctctgccaaaggagatttgccc 88
>39887_aly-MIR399d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 tctctgccaaaggagatttgccc 106
|||||||||||||||||||||||
Sbjct: 80 tctctgccaaaggagatttgccc 102
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 ctctgccaaaggagatttgccc 106
||||||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgccc 99
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 81 agctctctgccaaaggagatttgccc 106
||||| ||||||||||||||||||||
Sbjct: 76 agctcactgccaaaggagatttgccc 101
>41457_ptc-MIR399j:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 tgcattacagggcaagatcaccattggcag 33
||||||||||||||||| | ||||||||||
Sbjct: 1 tgcattacagggcaagacctccattggcag 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 ctctgccaaaggagatttgcccgg 108
||||||||||||||||||| ||||
Sbjct: 79 ctctgccaaaggagatttgtccgg 102
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 81 agctctctgccaaaggagatttgccc 106
||||| ||||||||||||||||||||
Sbjct: 84 agctcgctgccaaaggagatttgccc 109
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 81 agctctctgccaaaggagatttgccc 106
||||| ||||||||||||||||||||
Sbjct: 70 agctcactgccaaaggagatttgccc 95
>40384_rco-MIR399b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ctgccaaaggagatttgcccgg 108
||||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgcccgg 101
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgccc 106
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gctctctgccaaaggagatttgccc 106
|||||||||||| ||||||||||||
Sbjct: 95 gctctctgccaatggagatttgccc 119
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgccc 106
|||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgccc 97
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgccc 106
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgccc 106
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40387_rco-MIR399e:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 86 tctgccaaaggagatttgccc 106
|||||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgccc 101
>40385_rco-MIR399c:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 tgccaaaggagatttgcccgg 108
|||||||||||||||||||||
Sbjct: 71 tgccaaaggagatttgcccgg 91
>40096_ath-MIR399e:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 ctctgccaaaggagatttgcc 105
|||||||||||||||||||||
Sbjct: 76 ctctgccaaaggagatttgcc 96
>39888_aly-MIR399e:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 ctctgccaaaggagatttgcc 105
|||||||||||||||||||||
Sbjct: 115 ctctgccaaaggagatttgcc 135
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 ctgccaaaggagatttgccc 106
||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgccc 105
>42045_osa-MIR399e:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 ctgccaaaggagatttgccc 106
||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgccc 106
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 ctgccaaaggagatttgccc 106
||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgccc 97
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 ctgccaaaggagatttgccc 106
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 ctgccaaaggagatttgccc 106
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
