miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40104_ath-MIR405b:mirbase
          Length = 124

 Score =  214 bits (108), Expect = 1e-56
 Identities = 121/124 (97%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                       
Query: 28  actcataatcaaatgagtttatgattaaatgagttatgggtt-gacccaactcattttgt 86
           |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 124 actcataatcaaatgagtttataattaaatgagttatgggttagacccaactcattttgt 65

                                                                       
Query: 87  taaatgagttgggtctaacccataactcatttcatttgatgggttgagttgttaaatggg 146
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 64  taaatgagttgggtctaacccataactcatttcatttgatgggttgaattgttaaatggg 5

               
Query: 147 ttaa 150
           ||||
Sbjct: 4   ttaa 1



 Score = 83.8 bits (42), Expect = 4e-17
 Identities = 61/66 (92%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 54  aaatgagttatgggtt-gacccaactcattttgttaaatgagttgggtctaacccataac 112
           |||||||||||||||| ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 33  aaatgagttatgggttagacccaactcatttaacaaaatgagttgggtctaacccataac 92

                 
Query: 113 tcattt 118
           ||||||
Sbjct: 93  tcattt 98




>40105_ath-MIR405d:mirbase
          Length = 86

 Score =  129 bits (65), Expect = 7e-31
 Identities = 65/65 (100%)
 Strand = Plus / Plus

                                                                       
Query: 54  aaatgagttatgggttgacccaactcattttgttaaatgagttgggtctaacccataact 113
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13  aaatgagttatgggttgacccaactcattttgttaaatgagttgggtctaacccataact 72

                
Query: 114 cattt 118
           |||||
Sbjct: 73  cattt 77



 Score =  109 bits (55), Expect = 6e-25
 Identities = 81/87 (93%), Gaps = 2/87 (2%)
 Strand = Plus / Minus

                                                                       
Query: 45  tttatgattaaatgagttatgggtt-gacccaactcattttgttaaatgagttgggtcta 103
           ||||||||||||||||||||||||| ||||||||||||||    |||||||||||||| |
Sbjct: 86  tttatgattaaatgagttatgggttagacccaactcatttaacaaaatgagttgggtc-a 28

                                      
Query: 104 acccataactcatttcatttgatgggt 130
           |||||||||||||||||||||||||||
Sbjct: 27  acccataactcatttcatttgatgggt 1