miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40103_ath-MIR405a:mirbase
          Length = 157

 Score =  214 bits (108), Expect = 1e-56
 Identities = 121/124 (97%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaacccatttaacaattcaacccatcaaatgaaatgagttatgggttagacccaactca 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ttaacccatttaacaactcaacccatcaaatgaaatgagttatgggttagacccaactca 91

                                                                       
Query: 61  tttaacaaaatgagttgggtctaacccataactcatttaattataaactcatttgattat 120
           ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 90  tttaacaaaatgagttgggtc-aacccataactcatttaatcataaactcatttgattat 32

               
Query: 121 gagt 124
           ||||
Sbjct: 31  gagt 28



 Score = 83.8 bits (42), Expect = 3e-17
 Identities = 61/66 (92%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 33  aaatgagttatgggttagacccaactcatttaacaaaatgagttgggtctaacccataac 92
           |||||||||||||||| ||||||||||||||    |||||||||||||||||||||||||
Sbjct: 54  aaatgagttatgggtt-gacccaactcattttgttaaatgagttgggtctaacccataac 112

                 
Query: 93  tcattt 98
           ||||||
Sbjct: 113 tcattt 118




>40105_ath-MIR405d:mirbase
          Length = 86

 Score =  117 bits (59), Expect = 2e-27
 Identities = 81/87 (93%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  acccatcaaatgaaatgagttatgggttagacccaactcatttaacaaaatgagttgggt 80
           |||||||||||||||||||||||||||| ||||||||||||||    |||||||||||||
Sbjct: 1   acccatcaaatgaaatgagttatgggtt-gacccaactcattttgttaaatgagttgggt 59

                                      
Query: 81  ctaacccataactcatttaattataaa 107
           ||||||||||||||||||||| |||||
Sbjct: 60  ctaacccataactcatttaatcataaa 86



 Score =  115 bits (58), Expect = 8e-27
 Identities = 65/66 (98%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                      
Query: 33 aaatgagttatgggttagacccaactcatttaacaaaatgagttgggtctaacccataac 92
          ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 77 aaatgagttatgggttagacccaactcatttaacaaaatgagttgggtc-aacccataac 19

                
Query: 93 tcattt 98
          ||||||
Sbjct: 18 tcattt 13