miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47029_ath-miR406:pmrd
          Length = 200

 Score =  313 bits (158), Expect = 3e-86
 Identities = 186/200 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaagtcttaatttttagttatcacgatttagcacatatcaatctatagatttgattttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   taaagtcttaatttttagttatcacgatttagcacatatcaatctatagatttgattttt 60

                                                                       
Query: 61  cttttattagttcttaaattttgatttgagacagtaactattcaaatagaatgctattgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cttttattagttcttaaattttgatttgagacagtaactattcaaatagaatgctattgt 120

                                                                       
Query: 121 aatccagaatccgaaagaaacgaatcnnnnnnnnnnnnnncgagtcttcatagtaaaaat 180
           ||||||||||||||||||||||||||              ||||||||||||||||||||
Sbjct: 121 aatccagaatccgaaagaaacgaatcaaaaaaaaaaaaaacgagtcttcatagtaaaaat 180

                               
Query: 181 cgattaactaaaaaggatgg 200
           ||||||||||||||||||||
Sbjct: 181 cgattaactaaaaaggatgg 200