miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45814_miR408:micropc
          Length = 85

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 104 tgttttgtctctacccatgcactgcctcttccctggct 141
           ||||||| ||||||||||||||||||||||||||||||
Sbjct: 48  tgttttggctctacccatgcactgcctcttccctggct 85




>45593_miR408:micropc
          Length = 85

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 104 tgttttgtctctacccatgcactgcctcttccctggct 141
           ||||||| ||||||||||||||||||||||||||||||
Sbjct: 48  tgttttggctctacccatgcactgcctcttccctggct 85




>46505_miR408:micropc
          Length = 83

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 104 tgttttgtctctacccatgcactgcctcttccctggc 140
           ||||||| |||||||||||||||||||||||||||||
Sbjct: 47  tgttttggctctacccatgcactgcctcttccctggc 83




>46401_miR408:micropc
          Length = 83

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 104 tgttttgtctctacccatgcactgcctcttccctggc 140
           ||||||| |||||||||||||||||||||||||||||
Sbjct: 47  tgttttggctctacccatgcactgcctcttccctggc 83




>46052_miR408:micropc
          Length = 83

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 104 tgttttgtctctacccatgcactgcctcttccctggc 140
           ||||||| |||||||||||||||||||||||||||||
Sbjct: 47  tgttttggctctacccatgcactgcctcttccctggc 83




>45726_miR408:micropc
          Length = 83

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 104 tgttttgtctctacccatgcactgcctcttccctggc 140
           ||||||| |||||||||||||||||||||||||||||
Sbjct: 47  tgttttggctctacccatgcactgcctcttccctggc 83




>45531_miR408:micropc
          Length = 89

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 103 ctgttttgtctctacccatgcactgcctcttccctggct 141
           ||||| || |||||| |||||||||||||||||||||||
Sbjct: 51  ctgttgtggctctactcatgcactgcctcttccctggct 89



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 51 agacagggaacaagcagagcatggattgagtt 82
          |||||||||||| | ||||||||||| |||||
Sbjct: 1  agacagggaacaggtagagcatggatggagtt 32




>46728_miR408:micropc
          Length = 87

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 103 ctgttttgtctctacccatgcactgcctcttccctggc 140
           ||||| || |||||| ||||||||||||||||||||||
Sbjct: 50  ctgttgtggctctactcatgcactgcctcttccctggc 87




>46159_miR408:micropc
          Length = 87

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 103 ctgttttgtctctacccatgcactgcctcttccctggc 140
           ||||| || |||||| ||||||||||||||||||||||
Sbjct: 50  ctgttgtggctctactcatgcactgcctcttccctggc 87




>46359_miR408:micropc
          Length = 85

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 101 ctctgttttgtctctacccatgcactgcctcttccctggct 141
           |||||||||| ||  || |||||||||||||||||||||||
Sbjct: 45  ctctgttttggcttcactcatgcactgcctcttccctggct 85




>45949_miR408:micropc
          Length = 99

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 112 ctctacccatgcactgcctcttccctggc 140
           |||||| ||||||||||||||||||||||
Sbjct: 71  ctctactcatgcactgcctcttccctggc 99




>45551_miR408:micropc
          Length = 99

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 112 ctctacccatgcactgcctcttccctggc 140
           |||||| ||||||||||||||||||||||
Sbjct: 71  ctctactcatgcactgcctcttccctggc 99




>46309_miR408:micropc
          Length = 83

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 101 ctctgttttgtctctacccatgcactgcctcttccctggc 140
           |||||||||| ||  || ||||||||||||||||||||||
Sbjct: 44  ctctgttttggcttcactcatgcactgcctcttccctggc 83




>46155_miR408:micropc
          Length = 83

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 101 ctctgttttgtctctacccatgcactgcctcttccctggc 140
           |||||||||| ||  || ||||||||||||||||||||||
Sbjct: 44  ctctgttttggcttcactcatgcactgcctcttccctggc 83




>45398_miR408:micropc
          Length = 89

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 119 catgcactgcctcttccctggct 141
           |||||||||||||||||||||||
Sbjct: 67  catgcactgcctcttccctggct 89




>45394_miR408:micropc
          Length = 112

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 119 catgcactgcctcttccctggct 141
           |||||||||||||||||||||||
Sbjct: 90  catgcactgcctcttccctggct 112




>44861_miR408:micropc
          Length = 121

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 119 catgcactgcctcttccctggct 141
           |||||||||||||||||||||||
Sbjct: 99  catgcactgcctcttccctggct 121




>45860_miR408:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 catgcactgcctcttccctggc 140
           ||||||||||||||||||||||
Sbjct: 66  catgcactgcctcttccctggc 87




>45090_miR408:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 catgcactgcctcttccctggc 140
           ||||||||||||||||||||||
Sbjct: 66  catgcactgcctcttccctggc 87




>44968_miR408:micropc
          Length = 110

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 catgcactgcctcttccctggc 140
           ||||||||||||||||||||||
Sbjct: 89  catgcactgcctcttccctggc 110




>44821_miR408:micropc
          Length = 119

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 119 catgcactgcctcttccctggc 140
           ||||||||||||||||||||||
Sbjct: 98  catgcactgcctcttccctggc 119