miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39921_aly-MIR839:mirbase
          Length = 298

 Score =  244 bits (123), Expect = 3e-65
 Identities = 183/203 (90%)
 Strand = Plus / Plus

                                                                       
Query: 46  tctttaccaacctttcatcgttcccttctttgcaataacgctgttttgcaaaaccgtgat 105
           |||| |||||||| ||||||||||||||| || |||||||  |||||||||||| |  ||
Sbjct: 63  tcttcaccaacctctcatcgttcccttctctgtaataacgtcgttttgcaaaactgcaat 122

                                                                       
Query: 106 agtgctgagccgatgagcctctaatgaaattatagactcatcggctcaggaccattgcgg 165
            || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggtcctgagccgataagcctctaatgaaattatagactcatcggctcaggaccattgcgg 182

                                                                       
Query: 166 ttgtgcaaaacggtgttattgctgagaagggaacgcatgagaggttggtaaagacctcaa 225
           |||||||||||||||||||||| |||||||||||||||||||||||||| || || ||||
Sbjct: 183 ttgtgcaaaacggtgttattgccgagaagggaacgcatgagaggttggtgaaaacgtcaa 242

                                  
Query: 226 tggaatcttatggtactcttttt 248
            ||  ||||||| ||||||||||
Sbjct: 243 agggctcttatgctactcttttt 265



 Score =  115 bits (58), Expect = 2e-26
 Identities = 172/206 (83%), Gaps = 3/206 (1%)
 Strand = Plus / Minus

                                                                       
Query: 51  accaacctttcat-cgttcccttctttgcaataacgctgttttgcaaaaccgtgatagtg 109
           |||||||| |||| |||||||||||  |||||||| | |||||||| |||||  || || 
Sbjct: 231 accaacctctcatgcgttcccttctcggcaataacaccgttttgcacaaccgcaatggtc 172

                                                                       
Query: 110 ctgagccgatgagcctctaatgaaattatagactcatcggctcaggaccattgcggttgt 169
           ||||||||||||| || ||||   |||| || || ||||||||||||||||||| ||| |
Sbjct: 171 ctgagccgatgagtctataatttcattagaggcttatcggctcaggaccattgcagtttt 112

                                                                       
Query: 170 gcaaaacggtgttattgctgagaagggaacgcatgagaggttggtaaagacctcaatgga 229
           ||||||||  |||||| | |||||||||||| ||||||||||||| ||||  |||| |||
Sbjct: 111 gcaaaacgacgttattacagagaagggaacg-atgagaggttggtgaagatgtcaaagga 53

                                     
Query: 230 -atcttatggtactctttttgctcac 254
            | |||||| |||||||| |||||||
Sbjct: 52  gagcttatgctactctttgtgctcac 27