miRNEST 2.0, an integrative microRNA resource :: BLAST
>47070_ath-miR841:pmrd
Length = 212
Score = 357 bits (180), Expect = 5e-99
Identities = 204/212 (96%)
Strand = Plus / Plus
Query: 142 gcaccaacagtaccatgtgcagaaactctggtcttaagttgcttgtgaatacgagccact 201
||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gcaccaacactactatgtgcagaaactctgttcttaagttgcttgtgaatacgagccact 60
Query: 202 ggaaactgaaagaaacaaagaaacaatatcagtataaaatttcatcaaattagactacaa 261
||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 61 tgaaactgaaagaaacaaagaaacaatatcagtataaaattttatcaaattatactacaa 120
Query: 262 aaaatgaaatttctttgtttatttcaatttctagtgggtcgtattcacatacaactcaag 321
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 aaaatgaaatttctttgtttatttcaatttctagtgggtcgtattcacatgcaactcaag 180
Query: 322 actagagtatctacaacatggtctacttggtg 353
||||||||||||||||||||||| ||||||||
Sbjct: 181 actagagtatctacaacatggtcgacttggtg 212
Score = 61.9 bits (31), Expect = 4e-10
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 166 actctggtcttaagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaa 224
||||| ||||| |||||| ||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 188 actctagtcttgagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaa 130
Score = 48.1 bits (24), Expect = 7e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 271 tttctttgtttatttcaatttctagtgggtcgtattcaca 310
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 83 tttctttgtttctttcagtttcaagtggctcgtattcaca 44
>48203_ath-miRf11103-akr:pmrd
Length = 164
Score = 325 bits (164), Expect = 2e-89
Identities = 164/164 (100%)
Strand = Plus / Minus
Query: 166 actctggtcttaagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaac 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 actctggtcttaagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaac 105
Query: 226 aatatcagtataaaatttcatcaaattagactacaaaaaatgaaatttctttgtttattt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 aatatcagtataaaatttcatcaaattagactacaaaaaatgaaatttctttgtttattt 45
Query: 286 caatttctagtgggtcgtattcacatacaactcaagactagagt 329
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 caatttctagtgggtcgtattcacatacaactcaagactagagt 1
Score = 54.0 bits (27), Expect = 1e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 166 actctggtcttaagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaa 224
||||| ||||| ||||| ||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 1 actctagtcttgagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaa 59
Score = 54.0 bits (27), Expect = 1e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 271 tttctttgtttatttcaatttctagtgggtcgtattcacatacaactcaagactagagt 329
||||||||||| ||||| |||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 106 tttctttgtttctttcagtttccagtggctcgtattcacaagcaacttaagaccagagt 164
>48202_ath-miRf11102-akr:pmrd
Length = 142
Score = 281 bits (142), Expect = 3e-76
Identities = 142/142 (100%)
Strand = Plus / Minus
Query: 177 aagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaacaatatcagtat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaacaatatcagtat 83
Query: 237 aaaatttcatcaaattagactacaaaaaatgaaatttctttgtttatttcaatttctagt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aaaatttcatcaaattagactacaaaaaatgaaatttctttgtttatttcaatttctagt 23
Query: 297 gggtcgtattcacatacaactc 318
||||||||||||||||||||||
Sbjct: 22 gggtcgtattcacatacaactc 1
Score = 48.1 bits (24), Expect = 7e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 185 tgtgaatacgagccactggaaactgaaagaaacaaagaaa 224
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
Score = 48.1 bits (24), Expect = 7e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 271 tttctttgtttatttcaatttctagtgggtcgtattcaca 310
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 95 tttctttgtttctttcagtttccagtggctcgtattcaca 134
>47946_ath-miRf10846-akr:pmrd
Length = 142
Score = 250 bits (126), Expect = 9e-67
Identities = 138/142 (97%)
Strand = Plus / Minus
Query: 177 aagttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaacaatatcagtat 236
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 142 aagttgcttgtgaatacgagccacttgaaactgaaagaaacaaagaaacaatatcagtat 83
Query: 237 aaaatttcatcaaattagactacaaaaaatgaaatttctttgtttatttcaatttctagt 296
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aaaattttatcaaattatactacaaaaaatgaaatttctttgtttatttcaatttctagt 23
Query: 297 gggtcgtattcacatacaactc 318
||||||||||||||| ||||||
Sbjct: 22 gggtcgtattcacatgcaactc 1
Score = 54.0 bits (27), Expect = 1e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 178 agttgcttgtgaatacgagccactggaaactgaaagaaacaaagaaa 224
|||||| ||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 2 agttgcatgtgaatacgacccactagaaattgaaataaacaaagaaa 48
Score = 48.1 bits (24), Expect = 7e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 271 tttctttgtttatttcaatttctagtgggtcgtattcaca 310
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 95 tttctttgtttctttcagtttcaagtggctcgtattcaca 134
