miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00901;MIR845_1;AL031326.1/26214-26124 3702:Arabidopsis thaliana
          (thale cress)
          Length = 91

 Score =  180 bits (91), Expect = 2e-45
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                      
Query: 4  cggtttccatcacgtcaattgctatcagagcaacgcatgatgtataataactaagcgtcg 63
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cggtttccatcacgtcaattgctatcagagcaacgcatgatgtataataactaagcgtcg 60

                                         
Query: 64 ctctgataccaaattgatgcaatggaaacat 94
          |||||||||||||||||||||||||||||||
Sbjct: 61 ctctgataccaaattgatgcaatggaaacat 91




>RF00901;MIR845_1;AL031326.1/29579-29495 3702:Arabidopsis thaliana
          (thale cress)
          Length = 85

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 6  gtttccatcacgtcaattgctatcagagcaacgc 39
          |||||||||||||| |||||| ||||||| ||||
Sbjct: 3  gtttccatcacgtcgattgctgtcagagccacgc 36