miRNEST 2.0, an integrative microRNA resource :: BLAST
>40259_bna-MIR156b:mirbase
Length = 208
Score = 194 bits (98), Expect = 1e-50
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 gtgatgctggttgttgacagaagatagagagcactaaggatgacatgcaagtacatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gtgatgctggttgttgacagaagatagagagcactaaggatgacatgcaagtacatatgt 71
Query: 61 atgtatcatcacaccgcctgtggatgattacaaaaata 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgtatcatcacaccgcctgtggatgattacaaaaata 109
Score = 103 bits (52), Expect = 4e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 98 agcctgcatgtctactctttcgtgctctctatacttctgtcaccaccattat 149
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agcctgcatgtctactctttcgtgctctctatacttctgtcaccaccattat 188
>40012_ath-MIR157c:mirbase
Length = 217
Score = 135 bits (68), Expect = 1e-32
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 1 gtgatgctggttgttgacagaagatagagagcactaaggatgacatgcaagtacatatgt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11 gtgatgttggttgttgacagaagatagagagcactaaggatgacatgcaagtacatacat 70
Query: 61 atgtatcatcacaccgcctgtggatgat 88
|| |||||||||||||| ||||||||||
Sbjct: 71 atatatcatcacaccgcatgtggatgat 98
Score = 75.8 bits (38), Expect = 8e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 100 cctgcatgtctactctttcgtgctctctatacttctgtcaccaccattat 149
||||||| |||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 149 cctgcatctctactcttttgtgctctctatacttctgtcaccacctttat 198
>39800_aly-MIR157c:mirbase
Length = 293
Score = 113 bits (57), Expect = 4e-26
Identities = 81/88 (92%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 gtgatgctggttgttgacagaagatagagagcactaaggatgacatgcaagtacatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 42 gtgatgctggttgttgacagaagatagagagcactaaggatgacatgcaagcacata--c 99
Query: 61 atgtatcatcacaccgcctgtggatgat 88
|| |||||||||||| | ||||||||||
Sbjct: 100 atatatcatcacaccccatgtggatgat 127
Score = 73.8 bits (37), Expect = 3e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 101 ctgcatgtctactctttcgtgctctctatacttctgtcaccaccattat 149
|||||| |||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 201 ctgcatctctactcttttgtgctctctatacttctgtcaccacctttat 249
>40260_bna-MIR156c:mirbase
Length = 155
Score = 101 bits (51), Expect = 1e-22
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 1 gtgatgctggttgttgacagaagatagagagcactaaggatgacatgcaagtaca 55
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtgatgcaggttgttgacagaagatagagagcactaaggatgacatgcaagtaca 59
Score = 67.9 bits (34), Expect = 2e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 92 aaaaatagcctgcatgtctactctttcgtgctctctatacttctgtcaccaccattat 149
||||| ||||||||| | |||||||| ||||||||||||||||||||| ||||||||
Sbjct: 90 aaaaagagcctgcatctttactcttttgtgctctctatacttctgtcaataccattat 147
>40304_bol-MIR157a:mirbase
Length = 106
Score = 93.7 bits (47), Expect = 4e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 9 ggttgttgacagaagatagagagcactaaggatgacatgcaagtaca 55
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttgttgacagaagatagagagcactaaggatgacatgcaagtaca 47
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 110 tactctttcgtgctctctatacttctgtca 139
|||||||| |||||||||||||||||||||
Sbjct: 72 tactcttttgtgctctctatacttctgtca 101
>39801_aly-MIR157d:mirbase
Length = 256
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 8 tggttgttgacagaagatagagagcactaaggatgacatgcaa 50
|||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 31 tggttgctgacagaagatagagagcactaaggatgatatgcaa 73
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 9 ggttgttgacagaagatagagagcactaaggatgacatgca 49
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 ggttgttgacagaagatagagggcactaaggatgatatgca 41
>40013_ath-MIR157d:mirbase
Length = 221
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 8 tggttgttgacagaagatagagagcactaaggatg 42
|||||| ||||||||||||||||||||||||||||
Sbjct: 17 tggttgctgacagaagatagagagcactaaggatg 51
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcactaaggatgacatgca 49
||||||||||||||||||||||||| || ||||| |||||
Sbjct: 19 gttgttgacagaagatagagagcacaaaagatgatatgca 58
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcactaaggatgacatgca 49
||||||||||||||||||||||||| || ||||| |||||
Sbjct: 19 gttgttgacagaagatagagagcacaaaagatgatatgca 58
>40336_rco-MIR156g:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcactaaggatgacatgca 49
|||||||||||||||||||||||||| | ||||| |||||
Sbjct: 2 gttgttgacagaagatagagagcactgacgatgaaatgca 41
>41525_sly-MIR156a:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 14 ttgacagaagatagagagcactaaggatgacatgc 48
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcactaaggatgacatgcaag 51
||||||||||||||||||||||||| | ||||| |||||||
Sbjct: 7 gttgttgacagaagatagagagcacagatgatgaaatgcaag 48
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcactaaggatgacatgca 49
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 9 tgttgacagaagatagagagcactgacgatgaaatgca 46
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 ggttgttgacagaagatagagagcac 34
||||||||||||||||||||||||||
Sbjct: 1 ggttgttgacagaagatagagagcac 26
>40429_gma-MIR156e:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcactaaggatgacatgca 49
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
>40428_gma-MIR156d:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 ggttgttgacagaagatagagagcac 34
||||||||||||||||||||||||||
Sbjct: 16 ggttgttgacagaagatagagagcac 41
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tactctttcgtgctctctatacttctgtcaccacc 144
||||| || ||||||||||||||||||||| ||||
Sbjct: 102 tactcctttgtgctctctatacttctgtcatcacc 136
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 17 gttgttgacagaagatagagagcac 41
>41077_gra-MIR157b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
>41076_gra-MIR157a:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
>40337_rco-MIR156h:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gttgttgacagaagatagagagcac 34
|||||||||||||||||||||||||
Sbjct: 2 gttgttgacagaagatagagagcac 26
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ttgttgacagaagatagagagcac 34
||||||||||||||||||||||||
Sbjct: 18 ttgttgacagaagatagagagcac 41
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ttgttgacagaagatagagagcac 34
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ttgttgacagaagatagagagcac 34
||||||||||||||||||||||||
Sbjct: 21 ttgttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 14 ttgacagaagatagagagcac 34
|||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcac 87
>40335_rco-MIR156f:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ttgttgacagaagatagagagcac 34
||||||||||||||||||||||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 9 tgttgacagaagatagagagcac 31
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcac 26
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcac 166
>40011_ath-MIR157b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 17 tgttgacagaagatagagagcac 39
>40010_ath-MIR157a:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcac 24
>39799_aly-MIR157b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 2 tgttgacagaagatagagagcac 24
>39798_aly-MIR157a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgttgacagaagatagagagcac 34
|||||||||||||||||||||||
Sbjct: 14 tgttgacagaagatagagagcac 36
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 ttgacagaagatagagagcac 34
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 ttgacagaagatagagagcac 34
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tgacagaagatagagagcac 34
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tgacagaagatagagagcac 34
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tgacagaagatagagagcac 34
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 116 ttcgtgctctctatacttctgtca 139
|||||||||||||| |||||||||
Sbjct: 77 ttcgtgctctctattcttctgtca 100
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tgacagaagatagagagcac 34
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>39415_pta-MIR156a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 tgacagaagatagagagcac 34
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
