miRNEST 2.0, an integrative microRNA resource :: BLAST
>40261_bna-MIR159:mirbase
Length = 183
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 3 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
Query: 63 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 120
Query: 123 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
Query: 183 aca 185
|||
Sbjct: 181 aca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 274 bits (138), Expect = 2e-74
Identities = 176/188 (93%), Gaps = 3/188 (1%)
Strand = Plus / Plus
Query: 1 aagtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 60
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 18 aagtagagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagct 77
Query: 61 atgaatcccataagccctaatccttata---tataaaaaggatttggttatatggcttac 117
||| |||||||||||||||||||||||| | |||||||||||||||||||||||| |
Sbjct: 78 atggatcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgc 137
Query: 118 atatctcaggagctttaacttgccctttaattgcttttactcttctttggattgaaggga 177
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 138 atatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaaggga 197
Query: 178 gctctaca 185
||||||||
Sbjct: 198 gctctaca 205
>40016_ath-MIR159a:mirbase
Length = 184
Score = 248 bits (125), Expect = 1e-66
Identities = 170/184 (92%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 3 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 62
|||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 63 gaatcccataagccctaatccttatatat--aaaaaggatttggttatatggcttacata 120
| ||||||||||||||||||||| || | ||||||||||||||||||||| || ||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcata 120
Query: 121 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 181 ctac 184
||||
Sbjct: 181 ctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 85.7 bits (43), Expect = 1e-17
Identities = 146/176 (82%), Gaps = 7/176 (3%)
Strand = Plus / Plus
Query: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 68 ccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctcagg 127
|||||| || || | || | || ||||||| || ||||| || |||||||||||
Sbjct: 79 ccataaacctta--tcaaattcaaaataaggatt---ttttatggattccatatctcagg 133
Query: 128 agctttaactt-gccctttaattgcttttactcttctttggattgaagggagctct 182
|||||| |||| ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 134 agctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctct 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 8 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 67
||||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 68 ccataagcc 76
|||||||||
Sbjct: 67 ccataagcc 75
Score = 69.9 bits (35), Expect = 6e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 117 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 175
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 176 gagctct 182
|||||||
Sbjct: 181 gagctct 187
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 159 cttctttggattgaagggagctctaca 185
|||||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctctaca 197
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 159 cttctttggattgaagggagctctac 184
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 159 cttctttggattgaagggagctctac 184
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 160 ttctttggattgaagggagctctaca 185
||||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctctaca 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctctaca 185
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>40397_ahy-MIR159:mirbase
Length = 197
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctctaca 185
|||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctaca 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctctaca 185
|||||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctctaca 177
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 164 ttggattgaagggagctctaca 185
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tctttggattgaagggagctct 182
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctctac 184
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctcta 183
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctcta 183
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 ggcttacatatctcaggagcttta 134
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctcta 183
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 ggcttacatatctcaggagcttta 134
||||| ||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 163 tttggattgaagggagctcta 183
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 ggcttacatatctcaggagcttta 134
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
