miRNEST 2.0, an integrative microRNA resource :: BLAST
>40287_bna-MIR171c:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 61 gttcgattgagccgtgccaatatcacgc 88
>39850_aly-MIR171b:mirbase
Length = 137
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
|||||||||||||||||||||||||||||||||| |||||| || | ||||||||| ||
Sbjct: 23 gcgagatattagtgcggttcaatcaaatagtcgtcctcttaactcatggagatcggtgtt 82
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 83 gttcgattgagccgtgccaatatcacgc 110
>40321_bra-MIR171d:mirbase
Length = 101
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
|||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||
Sbjct: 7 gcgagatattagtgcggttcaatcaaatagtcgtgttctcacttgatagagatcggtttt 66
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 67 gttcgattgagccgtgccaatatcacgc 94
>40319_bra-MIR171b:mirbase
Length = 104
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
|||||||||||||||||||||||||||||||| |||||||| | ||||||| | ||||
Sbjct: 8 gcgagatattagtgcggttcaatcaaatagtctcactcttagttgatagagattgatttt 67
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 68 gttcgattgagccgtgccaatatcacgc 95
>40286_bna-MIR171b:mirbase
Length = 101
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
|||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||
Sbjct: 7 gcgagatattagtgcggttcaatcaaatagtcgtgttctcacttgatagagatcggtttt 66
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 67 gttcgattgagccgtgccaatatcacgc 94
>40285_bna-MIR171a:mirbase
Length = 104
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
|||||||||||||||||||||||||||||||| |||||||| | ||||||| | ||||
Sbjct: 8 gcgagatattagtgcggttcaatcaaatagtctcactcttagttgatagagattgatttt 67
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 68 gttcgattgagccgtgccaatatcacgc 95
>40061_ath-MIR171b:mirbase
Length = 117
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gcgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggtttt 60
|||||||||||||||||||||||||||||||||| |||||| || | |||| |||| ||
Sbjct: 12 gcgagatattagtgcggttcaatcaaatagtcgtcctcttaactcatggagaacggtgtt 71
Query: 61 gttcgattgagccgtgccaatatcacgc 88
||||||||||||||||||||||||||||
Sbjct: 72 gttcgattgagccgtgccaatatcacgc 99
>40062_ath-MIR171c:mirbase
Length = 116
Score = 61.9 bits (31), Expect = 7e-11
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 2 cgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggttttg 61
||||||||| |||||||||||||| | | ||||||||| | ||| ||||||||||
Sbjct: 26 cgagatattggtgcggttcaatcagaaaaccgtactcttttgttttaaagatcggtttat 85
Query: 62 ttcgattgagccgtgccaatatcacgc 88
|| ||||||||||||||||||||||||
Sbjct: 86 tt-gattgagccgtgccaatatcacgc 111
>39851_aly-MIR171c:mirbase
Length = 111
Score = 60.0 bits (30), Expect = 3e-10
Identities = 73/86 (84%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 2 cgagatattagtgcggttcaatcaaatagtcgtactcttagctattagagatcggttttg 61
||||||||| |||||||||||||| | | |||||||| | ||| |||||||||| |
Sbjct: 13 cgagatattggtgcggttcaatcagaaaactgtactcttttgttttaaagatcggttt-g 71
Query: 62 ttcgattgagccgtgccaatatcacg 87
|| |||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatcacg 97
>40318_bra-MIR171a:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 47 tagagatcggttttgttcgattgagccgtgccaatatcacg 87
||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 46 tagagatcggttt-gtttgattgagccgtgccaatatcacg 85
>40305_bol-MIR171a:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 47 tagagatcggttttgttcgattgagccgtgccaatatcacg 87
||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 52 tagagatcggttt-gtttgattgagccgtgccaatatcacg 91
>40289_bna-MIR171e:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 47 tagagatcggttttgttcgattgagccgtgccaatatcacg 87
||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 51 tagagatcggttt-gtttgattgagccgtgccaatatcacg 90
>40288_bna-MIR171d:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 47 tagagatcggttttgttcgattgagccgtgccaatatcacg 87
||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 52 tagagatcggttt-gtttgattgagccgtgccaatatcacg 91
>42641_tae-MIR171b:mirbase
Length = 138
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 ttcgattgagccgtgccaatatcacgc 88
|||||||||||||||||||||||||||
Sbjct: 87 ttcgattgagccgtgccaatatcacgc 113
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 ttgttcgattgagccgtgccaatatcacg 87
||||| |||||||||||||||||||||||
Sbjct: 62 ttgtttgattgagccgtgccaatatcacg 90
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 ttgttcgattgagccgtgccaatatcacg 87
||||| |||||||||||||||||||||||
Sbjct: 66 ttgtttgattgagccgtgccaatatcacg 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 cgagatattagtgcggttcaatcaaatagt 31
||||||||| |||||||||||||| |||||
Sbjct: 11 cgagatattggtgcggttcaatcagatagt 40
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 ttgttcgattgagccgtgccaatatcacg 87
||||| |||||||||||||||||||||||
Sbjct: 67 ttgtttgattgagccgtgccaatatcacg 95
>40360_rco-MIR171b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 59 ttgttcgattgagccgtgccaatatcacg 87
||||| |||||||||||||||||||||||
Sbjct: 58 ttgtttgattgagccgtgccaatatcacg 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 cgagatattagtgcggttcaatca 25
||||||||| ||||||||||||||
Sbjct: 4 cgagatattggtgcggttcaatca 27
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 91 gattgagccgtgccaatatcacg 113
>42762_zma-MIR171b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 63 gattgagccgtgccaatatcacg 85
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 63 gattgagccgtgccaatatcacg 85
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 94 gattgagccgtgccaatatcacg 116
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 tgttcgattgagccgtgccaatatcac 86
|||| ||||||||||||||||||||||
Sbjct: 118 tgtttgattgagccgtgccaatatcac 144
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 70 gattgagccgtgccaatatcacg 92
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcacg 93
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcacg 93
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 162 gattgagccgtgccaatatcacg 184
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatcacg 100
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 78 gattgagccgtgccaatatcacg 100
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 68 gattgagccgtgccaatatcacg 90
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcacg 87
|||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcacg 87
>42769_zma-MIR171i:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 66 gattgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 116 gattgagccgtgccaatatcac 137
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 98 gattgagccgtgccaatatcac 119
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>41539_sly-MIR171b:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 attgagccgtgccaatatcacg 87
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 cgagatattagtgcggttcaat 23
||||||||||||||||||||||
Sbjct: 2 cgagatattagtgcggttcaat 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 attgagccgtgccaatatcacg 87
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 59 ttgttcgattgagccgtgccaatatc 84
||||| ||||||||||||||||||||
Sbjct: 26 ttgtttgattgagccgtgccaatatc 1
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 56 gattgagccgtgccaatatcac 77
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 ttgttcgattgagccgtgccaatatc 84
||||| ||||||||||||||||||||
Sbjct: 75 ttgtttgattgagccgtgccaatatc 100
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>40457_gma-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 73 gattgagccgtgccaatatcac 94
>40454_gma-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 attgagccgtgccaatatcacg 87
||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacg 91
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatcac 86
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatca 85
|||||||||||||||||||||
Sbjct: 70 gattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatca 85
|||||||||||||||||||||
Sbjct: 69 gattgagccgtgccaatatca 89
>41179_aqc-MIR171c:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 3 gagatattagtgcggttcaat 23
|||||||||||||||||||||
Sbjct: 80 gagatattagtgcggttcaat 60
>42765_zma-MIR171e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatc 84
||||||||||||||||||||
Sbjct: 88 gattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatc 84
||||||||||||||||||||
Sbjct: 83 gattgagccgtgccaatatc 102
>42763_zma-MIR171c:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgagccgtgccaatatcacg 87
||||||||||||||||||||
Sbjct: 83 tgagccgtgccaatatcacg 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatc 84
||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 gattgagccgtgccaatatc 84
||||||||||||||||||||
Sbjct: 69 gattgagccgtgccaatatc 88
