miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 133 bits (67), Expect = 5e-32
Identities = 151/176 (85%), Gaps = 6/176 (3%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
||||||||||||||||||||||||||| | || || ||||||||| ||||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagcta 67
Query: 61 tggatcccacagccctataagca-gagattataattttggataggcttgtggcttgcata 119
|| ||||||||||||||| | || || | ||||| ||| ||| || ||||||||||
Sbjct: 68 tgaatcccacagccctatcaccatcag----tcatttt-gatgggcctgcggcttgcata 122
Query: 120 tctcaggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 175
|||||||||||| ||||||| | ||||||| || |||||||||||||||||||||
Sbjct: 123 tctcaggagctttattacctaatgttagatctttttttggattgaagggagctcta 178
>54777_vvi-miR159c:pmrd
Length = 190
Score = 131 bits (66), Expect = 2e-31
Identities = 152/178 (85%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct: 6 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
Query: 61 tggatcccacagccctataagcagagattataattttggataggcttgtggcttgcatat 120
|||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 66 tggatcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatat 125
Query: 121 ctcaggagcttcatta-ccttgtattagatccttgtttggattgaagggagctctaca 177
|||||||||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 126 ctcaggagctgcattatccaagt-ttagatccttgtttggattgaagggagctctaca 182
>51602_ptc-miR159a:pmrd
Length = 183
Score = 103 bits (52), Expect = 4e-23
Identities = 146/175 (83%), Gaps = 8/175 (4%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 61 tggatcccacagccctataagcagagattataattttggataggcttgtggcttgcatat 120
||||| |||||| ||||| || | | | ||||||| ||| |||||||||||
Sbjct: 68 tggat-ccacagtcctat------ctatca-actgaaggataggtttgcggcttgcatat 119
Query: 121 ctcaggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 175
||||||||||| ||| ||| | |||||||| | |||||||||||||||||||||
Sbjct: 120 ctcaggagctttattgcctaatgttagatccctttttggattgaagggagctcta 174
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||
Sbjct: 3 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 62
Query: 61 tggatcc 67
|||||||
Sbjct: 63 tggatcc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 61 tggatcc 67
|||||||
Sbjct: 68 tggatcc 74
>54378_pvu-miR159:pmrd
Length = 174
Score = 99.6 bits (50), Expect = 7e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatg 62
|||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 63 gatcccacag 72
||||||||||
Sbjct: 61 gatcccacag 70
>54377_pvu-miR159:pmrd
Length = 174
Score = 99.6 bits (50), Expect = 7e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatg 62
|||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 63 gatcccacag 72
||||||||||
Sbjct: 61 gatcccacag 70
>48539_gma-miR159a:pmrd
Length = 214
Score = 93.7 bits (47), Expect = 4e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctat 61
||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 62 ggatcccacag 72
|||||||||||
Sbjct: 79 ggatcccacag 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 150 ccttgtttggattgaagggagctctaca 177
|||| |||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
>48701_mtr-miR159c:pmrd
Length = 44
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctacatct 180
||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatct 26
>48728_mtr-miR319b:pmrd
Length = 42
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 ttggattgaagggagctctacatct 180
|||||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatct 25
>54931_zma-miR159b:pmrd
Length = 221
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 153 tgtttggattgaagggagctctacatct 180
|||||||||||||||||||||| |||||
Sbjct: 180 tgtttggattgaagggagctctgcatct 207
>54540_sly-miR159:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 44 attgagctgctgagctatggatcccacagccctat 78
||||||||||||| |||||||| || |||||||||
Sbjct: 41 attgagctgctgacctatggattcctcagccctat 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 113 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 170
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
Query: 171 ctcta 175
|||||
Sbjct: 173 ctcta 177
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctaca 177
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctaca 177
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctaca 177
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctacatct 180
|||||||||||||||||||| |||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 tgtttggattgaagggagctct 174
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 ttggattgaagggagctctaca 177
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctacatct 180
|||||||||||||||||||| |||||
Sbjct: 158 tttggattgaagggagctctgcatct 183
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 155 tttggattgaagggagctctacatct 180
|||||||||||||||||||| |||||
Sbjct: 242 tttggattgaagggagctctgcatct 267
