miRNEST 2.0, an integrative microRNA resource :: BLAST
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 81.8 bits (41), Expect = 8e-17
Identities = 82/93 (88%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 ggttatgcctggctccctgtatgccacaagctagagttcattcccttccatggattggct 60
|||| ||||||||||||||||||||||| | ||||| || |||||| | |||||||||
Sbjct: 6 ggttgtgcctggctccctgtatgccacacg-tagagaccactccctttcccggattggct 64
Query: 61 att-gccggtggcgtgcgaggagccaagcatac 92
||| || ||||||||||||||||||||||||||
Sbjct: 65 atttgcgggtggcgtgcgaggagccaagcatac 97
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 53 gattggctattgccggtggcgtgcgaggagccaagcatactctc 96
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 58 gattggctgttgccggtggcgtgcgaggagccaagcatactctc 101
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 8e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 53 gattggctattgccggtggcgtgcgaggagccaagcatactctc 96
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 59 gattggctgctgccggtggcgtgcgaggagccaagcatactctc 102
>40021_ath-MIR160c:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 gttatgcctggctccctgtatgccac 27
||||||||||||||||||||||||||
Sbjct: 1 gttatgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 2 gttatgcctggctccctgtatgccac 27
||||||||||||||||||||||||||
Sbjct: 20 gttatgcctggctccctgtatgccac 45
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 63 tgccggtggcgtgcgaggagccaagcat 90
|||||||||||| | |||||||||||||
Sbjct: 77 tgccggtggcgtacaaggagccaagcat 104
>40020_ath-MIR160b:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccacaag 30
|||||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccacaag 29
>39808_aly-MIR160b:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccacaag 30
|||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccacaag 45
>42707_zma-MIR160g:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 atgcctggctccctgtatgccaca 28
||||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgccaca 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ggtggcgtgcgaggagccaagcat 90
|||||||||| |||||||||||||
Sbjct: 61 ggtggcgtgcaaggagccaagcat 84
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgccac 27
||||||||||||||||||||||||
Sbjct: 7 tatgcctggctccctgtatgccac 30
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgccac 27
||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccac 42
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgccac 27
||||||||||||||||||||||||
Sbjct: 20 tatgcctggctccctgtatgccac 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tggcgtgcgaggagccaagcat 90
||||||||||||||||||||||
Sbjct: 91 tggcgtgcgaggagccaagcat 112
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgccac 27
||||||||||||||||||||||||
Sbjct: 6 tatgcctggctccctgtatgccac 29
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tggcgtgcgaggagccaagcat 90
||||||||||||||||||||||
Sbjct: 117 tggcgtgcgaggagccaagcat 138
>41869_far-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 atgcctggctccctgtatgccaca 28
||||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccaca 75
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgccac 27
||||||||||||||||||||||||
Sbjct: 30 tatgcctggctccctgtatgccac 53
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tggcgtgcgaggagccaagcat 90
||||||||||||||||||||||
Sbjct: 122 tggcgtgcgaggagccaagcat 143
>42702_zma-MIR160b:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccaca 43
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ggtggcgtgcgaggagccaagcat 90
|||||||||| |||||||||||||
Sbjct: 79 ggtggcgtgcaaggagccaagcat 102
>42701_zma-MIR160a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccaca 32
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>41923_osa-MIR160a:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccaca 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ggtggcgtgcgaggagccaagcat 90
|||||||||| |||||||||||||
Sbjct: 63 ggtggcgtgcaaggagccaagcat 86
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ggtggcgtgcgaggagccaagcat 90
|||||||||| |||||||||||||
Sbjct: 92 ggtggcgtgcaaggagccaagcat 115
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccaca 53
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ggtggcgtgcgaggagccaagcat 90
|||||||||| |||||||||||||
Sbjct: 90 ggtggcgtgcaaggagccaagcat 113
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcca 26
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcca 26
|||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgcca 40
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcca 26
|||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcca 26
|||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcca 26
|||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcca 26
|||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62
>39374_pab-MIR160a:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccaca 28
|||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccaca 36
>42706_zma-MIR160f:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcc 25
||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40
>42703_zma-MIR160c:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccac 28
>42677_ttu-MIR160:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tggcgtgcgaggagccaagca 89
|||||||||||||||||||||
Sbjct: 80 tggcgtgcgaggagccaagca 100
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41927_osa-MIR160e:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 tatgcctggctccctgtatgcc 25
||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcc 30
>41925_osa-MIR160c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccac 28
>41924_osa-MIR160b:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ggtggcgtgcgaggagccaagcat 90
|||||||||| |||||||||||||
Sbjct: 89 ggtggcgtgcaaggagccaagcat 112
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 atgcctggctccctgtatgcca 26
||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgccac 27
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40658_mtr-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40436_gma-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 gcctggctccctgtatgccac 27
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tgcctggctccctgtatgcca 26
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
