miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 216 bits (109), Expect = 5e-57
Identities = 151/165 (91%)
Strand = Plus / Minus
Query: 1 gtattaaacgtagactaataaccaaacagattacagatttcgcctgtaaactgcgagacg 60
||||| |||||||||||||||| ||||| |||||||| | || |||||||||||||||||
Sbjct: 221 gtatttaacgtagactaataacaaaacaaattacagaatccgtctgtaaactgcgagacg 162
Query: 61 aatctattaagcctaattaattcgtcattagcaaatgtttactgtagcaccacattgtca 120
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aatttattaagcctaattaatccgtcattagcaaatgtttactgtagcaccacattgtca 102
Query: 121 aatcaagacgtaattaggctcaaaagattcgtctcgcaatttaca 165
|||| | | ||||||||| ||||||||||||||||||||||||
Sbjct: 101 gatcatggagcaattaggcttaaaagattcgtctcgcaatttaca 57
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 tgtaaactgcgagacgaatctattaagcctaatt 78
|||||| |||||||||||||| ||||||||||||
Sbjct: 57 tgtaaattgcgagacgaatcttttaagcctaatt 90
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 155 bits (78), Expect = 2e-38
Identities = 117/130 (90%)
Strand = Plus / Minus
Query: 41 cgcctgtaaactgcgagacgaatctattaagcctaattaattcgtcattagcaaatgttt 100
||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 136 cgcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgttt 77
Query: 101 actgtagcaccacattgtcaaatcaagacgtaattaggctcaaaagattcgtctcgcaat 160
||| ||||||||||||||||||| | | | ||||||||| ||||||| |||||||||||
Sbjct: 76 actttagcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgcaat 17
Query: 161 ttacatgcaa 170
||||| ||||
Sbjct: 16 ttacacgcaa 7
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 45 tgtaaactgcgagacgaatctattaagcctaatt 78
|||||| ||||||||| |||| ||||||||||||
Sbjct: 12 tgtaaattgcgagacggatcttttaagcctaatt 45
>49008_osa-miR445a:pmrd
Length = 268
Score = 109 bits (55), Expect = 9e-25
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 51 ctgcgagacgaatctattaagcctaattaattcgtcattagcaaatgtttactgtagcac 110
||||||||||||| | ||||||||||||||| | | |||| ||| |||||||||||||
Sbjct: 80 ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcat 139
Query: 111 cacattgtcaaatcaagacgtaattaggctcaaaagattcgtctcgc 157
||||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 140 cacattgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgca 158
|||||||||| |||| ||||||||||||
Sbjct: 108 taattaggcttaaaaaattcgtctcgca 81
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 93.7 bits (47), Expect = 5e-20
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 60 gaatctattaagcctaattaattcgtcattagcaaatgtttactgtagcaccacattgtc 119
|||| ||| ||||||||||||| ||||||||||||||||||| |||| ||| |||||||
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57
Query: 120 aaatcaagacgtaattaggctcaaaagattcgtctcgcaattt 162
|||| | | || |||||||| |||||||||||||||| ||||
Sbjct: 56 aaattatggcgcaattaggcctaaaagattcgtctcgcgattt 14
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 77.8 bits (39), Expect = 3e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcaatttacatgcaaactgtgtaatt 181
||||||||||||||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 43 taattaggctcaaaagattcgtctcgcgatttccatgcaaactgtgcaatt 93
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 65.9 bits (33), Expect = 1e-11
Identities = 107/130 (82%), Gaps = 5/130 (3%)
Strand = Plus / Plus
Query: 42 gcctgtaaactgcgagacgaatctattaagcctaattaattcgtcattagcaaatgt--- 98
||||| |||| ||||||||||||| || ||||||||||| |||||||| || ||||
Sbjct: 1 gcctggaaaccgcgagacgaatcttttgagcctaattaagccgtcattaacacatgtagg 60
Query: 99 ttactgtagcaccacattgtcaaatcaagacgtaattaggctcaaaagattcgtctcgca 158
|||||||||||| || | ||||| || ||||||||||||||||||| |||||||
Sbjct: 61 ttactgtagcactta--tggctaatcatgaactaattaggctcaaaagatttgtctcgcg 118
Query: 159 atttacatgc 168
||||||||||
Sbjct: 119 atttacatgc 128
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgc 157
|||||||||||||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctcgc 12
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 63.9 bits (32), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 48 aaactgcgagacgaatctattaagcctaattaattcgtcattagcaaatgt---ttactg 104
|||| ||||||||||||| || |||||||||||| ||||||||||| |||| ||||||
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattactg 62
Query: 105 tagcac 110
||||||
Sbjct: 63 tagcac 68
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgc 157
|||||||||||||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtctcgc 8
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcaattt 162
|||||||||| |||||||||||||||| ||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcgattt 121
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 53 gcgagacgaatctattaagcctaatta 79
||||||||||||| |||||||||||||
Sbjct: 116 gcgagacgaatcttttaagcctaatta 90
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 61.9 bits (31), Expect = 2e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 56 agacgaatctattaagcctaattaattcgtcattagcaaatgt 98
|||||||||| || |||||||||||||||||||||||| ||||
Sbjct: 11 agacgaatcttttgagcctaattaattcgtcattagcacatgt 53
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtct 154
||||||||||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtct 11
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 3e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 42 gcctgtaaactgcgagacgaatctattaagcctaattaattcgtcattagcaaatgt 98
||||| |||| ||||||||||||| || |||||||||||| ||| ||||||| ||||
Sbjct: 128 gcctggaaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgt 72
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgc 157
|||||||||||||||||||||||||||
Sbjct: 91 taattaggctcaaaagattcgtctcgc 117
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctc 155
|||||||||||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctc 14
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgc 157
|||||||||||||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtctcgc 9
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcg 156
||||||||||||||||||||||||||
Sbjct: 88 taattaggctcaaaagattcgtctcg 113
Score = 48.1 bits (24), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 48 aaactgcgagacgaatctattaagcctaattaattcgtcattag 91
|||| ||||||||||||| || ||||||||||| |||||||||
Sbjct: 4 aaaccgcgagacgaatcttttgagcctaattaagccgtcattag 47
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 48 aaactgcgagacgaatctattaagcctaattaattcgtcattagca 93
|||| |||||| |||||| || |||||||||||| |||||||||||
Sbjct: 119 aaaccgcgagatgaatctcttgagcctaattaatccgtcattagca 74
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtct 154
||||||||||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtct 12
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgcaattt 162
||||||||||||||||||| ||||||| ||||
Sbjct: 34 taattaggctcaaaagatttgtctcgcgattt 3
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgc 157
|||||| ||||||||||||||||||||
Sbjct: 87 taattatgctcaaaagattcgtctcgc 113
Score = 40.1 bits (20), Expect = 7e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 48 aaactgcgagacgaatctattaagcctaattaattcgtcattag 91
|||| ||||||||||||| || ||| |||||||| | |||||||
Sbjct: 118 aaaccgcgagacgaatcttttgagcataattaatccatcattag 75
>49015_osa-miR445h:pmrd
Length = 277
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 130 gtaattaggctcaaaagattcgtctcgc 157
|||||||| |||||||||||||||||||
Sbjct: 155 gtaattagactcaaaagattcgtctcgc 182
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ctgcgagacgaatctattaagcctaattaat 81
||||||||||||| | |||||||||||||||
Sbjct: 93 ctgcgagacgaattttttaagcctaattaat 123
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgca 158
|||||||||| |||| ||||||||||||
Sbjct: 121 taattaggcttaaaaaattcgtctcgca 94
>49013_osa-miR445f:pmrd
Length = 305
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 130 gtaattaggctcaaaagattcgtctcgc 157
|||||||| |||||||||||||||||||
Sbjct: 170 gtaattagactcaaaagattcgtctcgc 197
>49012_osa-miR445e:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 130 gtaattaggctcaaaagattcgtctcgc 157
|||||||| |||||||||||||||||||
Sbjct: 149 gtaattagactcaaaagattcgtctcgc 176
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ctgcgagacgaatctattaagcctaattaat 81
||||||||||||| | |||||||||||||||
Sbjct: 87 ctgcgagacgaattttttaagcctaattaat 117
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgca 158
|||||||||| |||| ||||||||||||
Sbjct: 115 taattaggcttaaaaaattcgtctcgca 88
>49009_osa-miR445b:pmrd
Length = 264
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 130 gtaattaggctcaaaagattcgtctcgc 157
|||||||| |||||||||||||||||||
Sbjct: 148 gtaattagactcaaaagattcgtctcgc 175
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ctgcgagacgaatctattaagcctaattaat 81
||||||||||||| | |||||||||||||||
Sbjct: 92 ctgcgagacgaattttttaagcctaattaat 122
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgca 158
|||||||||| |||| ||||||||||||
Sbjct: 120 taattaggcttaaaaaattcgtctcgca 93
>49010_osa-miR445c:pmrd
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 51 ctgcgagacgaatctattaagcctaattaat 81
||||||||||||| | |||||||||||||||
Sbjct: 85 ctgcgagacgaattttttaagcctaattaat 115
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 130 gtaattaggctcaaaagattcgtctcg 156
||||||||||| |||||||||||||||
Sbjct: 147 gtaattaggcttaaaagattcgtctcg 173
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 54 cgagacgaatctattaagcctaatta 79
|||||||||||| |||||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaatta 148
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctcgca 158
|||||||||| |||| ||||||||||||
Sbjct: 113 taattaggcttaaaaaattcgtctcgca 86
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 53 gcgagacgaatctattaagcctaattaat 81
||||||| |||||||| ||||||||||||
Sbjct: 11 gcgagacaaatctattgagcctaattaat 39
>49011_osa-miR445d:pmrd
Length = 312
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 67 ttaagcctaattaattcgtcattagcaaatgtttactgtagcaccacat 115
||||||||||||||| | | |||| || ||||||| ||||||| |||||
Sbjct: 193 ttaagcctaattaatccataattaacacatgtttagtgtagcatcacat 145
