miRNEST 2.0, an integrative microRNA resource :: BLAST
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 170 bits (86), Expect = 2e-43
Identities = 114/122 (93%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 6 gggaaatagcgagacgaatcttttaagcctaattagtccgtgattagccattaagtgcta 65
|||||||| ||||||||||||||| ||||||||||||| ||||||| |||| || |||||
Sbjct: 122 gggaaataacgagacgaatcttttgagcctaattagtctgtgattaaccataaa-tgcta 64
Query: 66 cagtaacccacatgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggttt 125
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 63 cagtaacccacatgtactaatgacggcttaattaggctcaaaagattcgtctcgcggttt 4
Query: 126 cc 127
||
Sbjct: 3 cc 2
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
|||||||||||||||| ||||||||||
Sbjct: 9 gcgagacgaatcttttgagcctaatta 35
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcg 119
||||||| ||||||||||||||||||
Sbjct: 88 taattaggctcaaaagattcgtctcg 113
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 165 bits (83), Expect = 1e-41
Identities = 114/123 (92%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 9 aaatagcgagacgaatcttttaagcctaattagtccgtgattagccattaagtgctacag 68
|||| ||||||| |||||||| |||||||||||| | ||||||||||| |||||||||||
Sbjct: 122 aaatcgcgagacaaatcttttgagcctaattagttcatgattagccat-aagtgctacag 64
Query: 69 taacccacatgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggtttcca 128
||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 63 taacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttcca 4
Query: 129 ggc 131
|||
Sbjct: 3 ggc 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
|||||||||||||||| ||||||||||
Sbjct: 12 gcgagacgaatcttttgagcctaatta 38
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcg 121
||||||| ||||||||||| ||||||||
Sbjct: 91 taattaggctcaaaagatttgtctcgcg 118
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 147 bits (74), Expect = 2e-36
Identities = 113/124 (91%), Gaps = 4/124 (3%)
Strand = Plus / Minus
Query: 7 ggaaatagcgagacgaatcttttaagcctaattagtccgt---gattagccattaagtgc 63
|||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaagcctaattagtactacacgattagccat-aagtgc 65
Query: 64 tacagtaacccacatgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggt 123
|||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 64 tacagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggt 5
Query: 124 ttcc 127
||||
Sbjct: 4 ttcc 1
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaattagtccgtgattagc 53
|||||||||||||||| |||||||||| ||||| ||||||
Sbjct: 8 gcgagacgaatcttttgagcctaattaatccgtcattagc 47
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcggtttcc 127
||||||| || ||||||||||||||||| |||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcgatttcc 123
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 143 bits (72), Expect = 4e-35
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 16 gagacgaatcttttaagcctaattagtccgtgattagccattaagtgctacagtaaccca 75
|||||||||||||| |||||||||||| |||||| |||| |||||||||| |||||||
Sbjct: 14 gagacgaatcttttgagcctaattagtatatgattaaccat-aagtgctacaataaccca 72
Query: 76 catgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggtttccaggc 131
||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 73 catgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttccaggc 128
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 14 gcgagacgaatcttttaagcctaattagtccgtgattagc 53
|||||||||||||||| |||||||||| ||||| ||||||
Sbjct: 117 gcgagacgaatcttttgagcctaattaatccgttattagc 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 94 taattagtctcaaaagattcgtctc 118
||||||| |||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctc 14
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 125 bits (63), Expect = 9e-30
Identities = 100/111 (90%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 17 agacgaatcttttaagcctaattagtccgtgattagccattaagtgctacagtaacccac 76
||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||
Sbjct: 12 agacgaatcttttgagcctaattagtccatgattagttat-aagtgctacagtaacccgt 70
Query: 77 atgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggtttcc 127
||||||||||||||| |||||||| ||||| |||||| |||||||||||||
Sbjct: 71 atgtgctaatgacggattaattaggctcaagagattcatctcgcggtttcc 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 94 taattagtctcaaaagattcgtct 117
||||||| ||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtct 12
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 121 bits (61), Expect = 1e-28
Identities = 107/121 (88%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 7 ggaaatagcgagacgaatcttttaagcctaattagtccgtgattagccattaagtgctac 66
|||||| ||||||| |||||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 1 ggaaatcgcgagacaaatcttttgagcctaattagtccatgattagccataaa-tgctat 59
Query: 67 agtaacccacatgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggtttc 126
||||||||| || | ||||||| || ||||||| |||||||||||||||||||||||||
Sbjct: 60 agtaacccaaatatactaatgatggattaattatgctcaaaagattcgtctcgcggtttc 119
Query: 127 c 127
|
Sbjct: 120 c 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 94 taattagtctcaaaagattcgtctcgcggtttcc 127
||||||| ||||||||||| |||||||| |||||
Sbjct: 34 taattaggctcaaaagatttgtctcgcgatttcc 1
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 117 bits (59), Expect = 2e-27
Identities = 99/111 (89%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 7 ggaaatagcgagacgaatcttttaagcctaattagtccgtgattagccattaagtgctac 66
|||||| |||||||||||||||| || |||||||| || ||||| ||||| ||||||||
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaattagcccatgatttgccat-aagtgctat 62
Query: 67 agtaacccacatgtgctaatgacggcttaattagtctcaaaagattcgtct 117
|| ||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 61 agcaacccacatgtgctaatgacgaattaattaggctcaaaagattcgtct 11
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcggtttcc 127
||||||| |||||||||||||||||||| |||||
Sbjct: 87 taattagactcaaaagattcgtctcgcgatttcc 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 17 agacgaatcttttaagcctaattagtccgtgattagc 53
||||||||||||| |||||||||| | ||| ||||||
Sbjct: 11 agacgaatcttttgagcctaattaattcgtcattagc 47
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 91.7 bits (46), Expect = 1e-19
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 7 ggaaatagcgagacgaatcttttaagcctaattagtccgtgattagccattaagtgctac 66
|||||| |||||||||||||||| ||||||||||||| |||||| ||| ||||||||||
Sbjct: 76 ggaaatcgcgagacgaatcttttgagcctaattagtctatgattaacca-taagtgctac 18
Query: 67 agtaacccacatgt 80
||||||||||||||
Sbjct: 17 agtaacccacatgt 4
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcggtttcca 128
||||||| |||||||||||||||||||| ||||||
Sbjct: 43 taattaggctcaaaagattcgtctcgcgatttcca 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 gtgctacagtaacccacatgtgct 83
|||||| |||||||||||||||||
Sbjct: 116 gtgctatagtaacccacatgtgct 139
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 65.9 bits (33), Expect = 7e-12
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 15 cgagacgaatcttttaagcctaattagtccgtgattagccattaagtgctacagtaaccc 74
|||||| |||||||| || ||||||||||| |||||||||| ||||||||| || |||||
Sbjct: 3 cgagacaaatcttttgagtctaattagtccatgattagcca-taagtgctatagcaaccc 61
Query: 75 acatg 79
|||||
Sbjct: 62 acatg 66
>49004_osa-miR442:pmrd
Length = 233
Score = 56.0 bits (28), Expect = 7e-09
Identities = 97/118 (82%), Gaps = 4/118 (3%)
Strand = Plus / Plus
Query: 9 aaatagcgagacgaatcttttaagcctaattagtccgtgat-tagccattaagtgctaca 67
|||| |||||||||||||||||||||||||| ||| |||| | | || ||||||||
Sbjct: 60 aaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctaca 119
Query: 68 gtaacccacatgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggttt 125
|||| |||| |||||||||||| |||||||| || || | ||||||||||| ||||
Sbjct: 120 gtaa---acatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 gcgagacgaatcttttaagcctaattagtccgtgattagc 53
||||||||||| | ||||||||||||| ||||| ||||||
Sbjct: 169 gcgagacgaatttattaagcctaattaatccgtcattagc 130
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 52.0 bits (26), Expect = 1e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 75 acatgtgctaatgacggcttaattagtctcaaaagattcgtctcgcggtttccaggcg 132
|||| ||||||||| || |||||||| || || | |||||||||||||||| ||||||
Sbjct: 79 acatttgctaatgatggattaattaggcttaataaattcgtctcgcggtttacaggcg 136
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 aaatagcgagacgaatcttttaagcctaatt 39
|||| |||||||| |||||||||||||||||
Sbjct: 15 aaattgcgagacggatcttttaagcctaatt 45
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 14 gcgagacgaatcttttaagcctaattagtccgtgattagc 53
||||||||||| | ||||||||||||| ||| | ||||||
Sbjct: 124 gcgagacgaatttattaagcctaattaatccatcattagc 85
>49010_osa-miR445c:pmrd
Length = 260
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 cgagacgaatcttttaagcctaatta 40
||||||||||||||||||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaatta 148
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
||||||||||| |||||||||||||||
Sbjct: 87 gcgagacgaattttttaagcctaatta 113
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ggaaatagcgagacgaatcttttaagcctaatt 39
|||||| ||||||||||||||||| ||||||||
Sbjct: 12 ggaaatcgcgagacgaatcttttaggcctaatt 44
>49015_osa-miR445h:pmrd
Length = 277
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcg 121
||||||| ||||||||||||||||||||
Sbjct: 156 taattagactcaaaagattcgtctcgcg 183
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
||||||||||| |||||||||||||||
Sbjct: 95 gcgagacgaattttttaagcctaatta 121
>49013_osa-miR445f:pmrd
Length = 305
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcg 121
||||||| ||||||||||||||||||||
Sbjct: 171 taattagactcaaaagattcgtctcgcg 198
>49012_osa-miR445e:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcg 121
||||||| ||||||||||||||||||||
Sbjct: 150 taattagactcaaaagattcgtctcgcg 177
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
||||||||||| |||||||||||||||
Sbjct: 89 gcgagacgaattttttaagcctaatta 115
>49009_osa-miR445b:pmrd
Length = 264
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcg 121
||||||| ||||||||||||||||||||
Sbjct: 149 taattagactcaaaagattcgtctcgcg 176
>49008_osa-miR445a:pmrd
Length = 268
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 94 taattagtctcaaaagattcgtctcgcg 121
||||||| ||||||||||||||||||||
Sbjct: 160 taattagactcaaaagattcgtctcgcg 187
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
||||||||||| |||||||||||||||
Sbjct: 82 gcgagacgaattttttaagcctaatta 108
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 gcgagacgaatcttttaagcctaatta 40
||||||||||| |||||||||||||||
Sbjct: 94 gcgagacgaattttttaagcctaatta 120
