miRNEST 2.0, an integrative microRNA resource :: BLAST
>48428_cpt-miR408:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 catgcactgcctcttccctggctctct 106
|||||||||||||||||||||||||||
Sbjct: 69 catgcactgcctcttccctggctctct 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 gggaacaggcagagcatgaatggaac 48
|||||||||||||||||| |||||||
Sbjct: 13 gggaacaggcagagcatggatggaac 38
>47031_ath-miR408:pmrd
Length = 218
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 catgcactgcctcttccctggctctctcttt 110
|||||||||||||||||||||||| ||||||
Sbjct: 119 catgcactgcctcttccctggctccctcttt 149
>54892_vvi-miR408:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 80 catgcactgcctcttccctggctct 104
|||||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggctct 100
>51397_ppt-miR408b:pmrd
Length = 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 ctcatgcactgcctcttccctggct 102
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>51347_ppe-miR408:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 ctcatgcactgcctcttccctggct 102
|||||||||||||||||||||||||
Sbjct: 72 ctcatgcactgcctcttccctggct 96
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 80 catgcactgcctcttccctggctc 103
||||||||||||||||||||||||
Sbjct: 27 catgcactgcctcttccctggctc 4
>51762_ptc-miR408:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 catgcactgcctcttccctggct 102
|||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggct 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gggaacaggcagagcatgaatgga 46
|||||||||||||||||| |||||
Sbjct: 18 gggaacaggcagagcatggatgga 41
>51566_pta-miR408:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 atgcactgcctcttccctggctc 103
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>48584_gma-miR408a:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 acgctcatgcactgcctcttccctggc 101
||||||||||||||||| |||||||||
Sbjct: 94 acgctcatgcactgcctgttccctggc 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 ctgggaacaggcagagcatgaatggaactatcaa 54
|||||||||||||| ||| ||||||| |||||||
Sbjct: 2 ctgggaacaggcagggcacgaatggagctatcaa 35
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 80 catgcactgcctcttccctggct 102
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>55104_zma-miR408:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174
>54690_tae-miR408:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158
>54649_sof-miR408d:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198
>54648_sof-miR408c:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54647_sof-miR408b:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54646_sof-miR408a:pmrd
Length = 283
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 atgcactgcctcttccctggct 102
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>48975_osa-miR408:pmrd
Length = 213
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggctc 103
||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggct 102
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>54389_rco-miR408:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgcactgcctcttccctggct 102
|||||||||||||||||||||
Sbjct: 91 tgcactgcctcttccctggct 111
>48317_bdi-miR408:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 catgcactgcctcttccctgg 100
|||||||||||||||||||||
Sbjct: 68 catgcactgcctcttccctgg 88
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 gggaacaggcagagcatgaatgga 46
|||||||||||||||||| |||||
Sbjct: 3 gggaacaggcagagcatggatgga 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 catgcactgcctcttccctg 99
||||||||||||||||||||
Sbjct: 60 catgcactgcctcttccctg 79
