miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 194 bits (98), Expect = 1e-50
Identities = 116/122 (95%)
Strand = Plus / Minus
Query: 4 ctgtaaactgcgagacgagtttattaagcctaattaattcgtcattagcaaatgtttact 63
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 178 ctgtaaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgtttact 119
Query: 64 gtagcaccacattgtcaaatcacggcgcaattaggctcaaaagattcgtctcgcaattta 123
||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||
Sbjct: 118 gtagcaccacattgtcagatcatggagcaattaggcttaaaagattcgtctcgcaattta 59
Query: 124 ca 125
||
Sbjct: 58 ca 57
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 165 bits (83), Expect = 1e-41
Identities = 113/123 (91%)
Strand = Plus / Minus
Query: 3 cctgtaaactgcgagacgagtttattaagcctaattaattcgtcattagcaaatgtttac 62
||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||
Sbjct: 134 cctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgtttac 75
Query: 63 tgtagcaccacattgtcaaatcacggcgcaattaggctcaaaagattcgtctcgcaattt 122
| ||||||||||||||||||| | || ||||||||||| ||||||| |||||||||||||
Sbjct: 74 tttagcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgcaattt 15
Query: 123 aca 125
|||
Sbjct: 14 aca 12
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 111 bits (56), Expect = 1e-25
Identities = 89/100 (89%)
Strand = Plus / Minus
Query: 23 tttattaagcctaattaattcgtcattagcaaatgtttactgtagcaccacattgtcaaa 82
||||| ||||||||||||| ||||||||||||||||||| |||| ||| ||||||| |||
Sbjct: 113 tttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgttaaa 54
Query: 83 tcacggcgcaattaggctcaaaagattcgtctcgcaattt 122
| | ||||||||||||| |||||||||||||||| ||||
Sbjct: 53 ttatggcgcaattaggcctaaaagattcgtctcgcgattt 14
>49008_osa-miR445a:pmrd
Length = 268
Score = 109 bits (55), Expect = 5e-25
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 11 ctgcgagacgagtttattaagcctaattaattcgtcattagcaaatgtttactgtagcac 70
||||||||||| ||| ||||||||||||||| | | |||| ||| |||||||||||||
Sbjct: 80 ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcat 139
Query: 71 cacattgtcaaatcacggcgcaattaggctcaaaagattcgtctcgc 117
||||||||||||||| || | |||||| |||||||||||||||||||
Sbjct: 140 cacattgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgcaatttacatgc 128
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 92 aattaggctcaaaagatttgtctcgcgatttacatgc 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtctcgc 117
||||||||||||||||||||||||||
Sbjct: 37 aattaggctcaaaagattcgtctcgc 12
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgcaatttacatgc 128
|||||||||||||||||||||||||| |||| |||||
Sbjct: 44 aattaggctcaaaagattcgtctcgcgatttccatgc 80
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtctcgc 117
||||||||||||||||||||||||||
Sbjct: 33 aattaggctcaaaagattcgtctcgc 8
Score = 48.1 bits (24), Expect = 2e-06
Identities = 56/66 (84%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 8 aaactgcgagacgagtttattaagcctaattaattcgtcattagcaaatgt---ttactg 64
|||| ||||||||| | | || |||||||||||| ||||||||||| |||| ||||||
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattactg 62
Query: 65 tagcac 70
||||||
Sbjct: 63 tagcac 68
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgcaattt 122
||||||||| |||||||||||||||| ||||
Sbjct: 91 aattaggcttaaaagattcgtctcgcgattt 121
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtctcgc 117
||||||||||||||||||||||||||
Sbjct: 34 aattaggctcaaaagattcgtctcgc 9
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcg 116
|||||||||||||||||||||||||
Sbjct: 89 aattaggctcaaaagattcgtctcg 113
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgc 117
||||||||||||||||||||||||||
Sbjct: 92 aattaggctcaaaagattcgtctcgc 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtctc 115
||||||||||||||||||||||||
Sbjct: 37 aattaggctcaaaagattcgtctc 14
Score = 40.1 bits (20), Expect = 4e-04
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 3 cctgtaaactgcgagacgagtttattaagcctaattaattcgtcattagcaaatgt 58
|||| |||| ||||||||| | | || |||||||||||| ||| ||||||| ||||
Sbjct: 127 cctggaaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgt 72
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 agcctaattaattcgtcattagcaaatgt 58
|||||||||||||||||||||||| ||||
Sbjct: 25 agcctaattaattcgtcattagcacatgt 53
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtct 114
|||||||||||||||||||||||
Sbjct: 33 aattaggctcaaaagattcgtct 11
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgcaattt 122
|||||| ||||||||||||||||||| ||||
Sbjct: 88 aattagactcaaaagattcgtctcgcgattt 118
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtct 114
|||||||||||||||||||||||
Sbjct: 34 aattaggctcaaaagattcgtct 12
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 30 agcctaattaattcgtcattagca 53
|||||||||||| |||||||||||
Sbjct: 97 agcctaattaatccgtcattagca 74
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 92 aattaggctcaaaagattcgtctcgcaattt 122
|||||||||||||||||| ||||||| ||||
Sbjct: 33 aattaggctcaaaagatttgtctcgcgattt 3
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgc 117
||||| ||||||||||||||||||||
Sbjct: 88 aattatgctcaaaagattcgtctcgc 113
>49015_osa-miR445h:pmrd
Length = 277
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ctgcgagacgagtttattaagcctaattaat 41
||||||||||| ||| |||||||||||||||
Sbjct: 93 ctgcgagacgaattttttaagcctaattaat 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgc 117
|||||| |||||||||||||||||||
Sbjct: 157 aattagactcaaaagattcgtctcgc 182
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ctgcgagacgagtttattaagcctaattaat 41
||||||||||| ||| |||||||||||||||
Sbjct: 92 ctgcgagacgaattttttaagcctaattaat 122
>49012_osa-miR445e:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ctgcgagacgagtttattaagcctaattaat 41
||||||||||| ||| |||||||||||||||
Sbjct: 87 ctgcgagacgaattttttaagcctaattaat 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgc 117
|||||| |||||||||||||||||||
Sbjct: 151 aattagactcaaaagattcgtctcgc 176
>49010_osa-miR445c:pmrd
Length = 260
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 ctgcgagacgagtttattaagcctaattaat 41
||||||||||| ||| |||||||||||||||
Sbjct: 85 ctgcgagacgaattttttaagcctaattaat 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcg 116
||||||||| |||||||||||||||
Sbjct: 149 aattaggcttaaaagattcgtctcg 173
>49013_osa-miR445f:pmrd
Length = 305
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgc 117
|||||| |||||||||||||||||||
Sbjct: 172 aattagactcaaaagattcgtctcgc 197
>49009_osa-miR445b:pmrd
Length = 264
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 92 aattaggctcaaaagattcgtctcgc 117
|||||| |||||||||||||||||||
Sbjct: 150 aattagactcaaaagattcgtctcgc 175
>49011_osa-miR445d:pmrd
Length = 312
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 27 ttaagcctaattaattcgtcattagcaaatgtttactgtagcaccacat 75
||||||||||||||| | | |||| || ||||||| ||||||| |||||
Sbjct: 193 ttaagcctaattaatccataattaacacatgtttagtgtagcatcacat 145
