miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48563_gma-miR169c:pmrd
Length = 115
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 aagtgggatgaagccaaggatgacttgccgacattaatttgccattaagctaacgagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtgggatgaagccaaggatgacttgccgacattaatttgccattaagctaacgagtta 60
Query: 61 ggtagaatcatttgttagattttcccggcaggtcatcctctggctatatttggct 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtagaatcatttgttagattttcccggcaggtcatcctctggctatatttggct 115
>51652_ptc-miR169a:pmrd
Length = 165
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 aagtgggatgaagccaaggatgacttgccgac 32
|||||| ||| |||||||||||||||||||||
Sbjct: 1 aagtggtatgcagccaaggatgacttgccgac 32
>48309_bdi-miR169a:pmrd
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 gggatgaagccaaggatgacttgccgac 32
|||||| |||||||||||||||||||||
Sbjct: 10 gggatgcagccaaggatgacttgccgac 37
>54808_vvi-miR169f:pmrd
Length = 184
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacattaatttgc 42
|||||||||||||||||||| | ||||||||
Sbjct: 14 agccaaggatgacttgccgaaaataatttgc 44
>55005_zma-miR169c:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gggatgaagccaaggatgacttgccg 30
|||||| |||||||||||||||||||
Sbjct: 15 gggatgcagccaaggatgacttgccg 40
>52003_ptc-miRf10181-akr:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccgac 32
|||| |||||||||||||||||||||
Sbjct: 6 gatgcagccaaggatgacttgccgac 31
>51660_ptc-miR169c:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccgac 32
|||| |||||||||||||||||||||
Sbjct: 7 gatgcagccaaggatgacttgccgac 32
>51659_ptc-miR169b:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccgac 32
|||| |||||||||||||||||||||
Sbjct: 7 gatgcagccaaggatgacttgccgac 32
>49845_osa-miRf10630-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 gggatgaagccaaggatgacttgccg 30
|||||| |||||||||||||||||||
Sbjct: 109 gggatgcagccaaggatgacttgccg 84
>48878_osa-miR169c:pmrd
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gggatgaagccaaggatgacttgccg 30
|||||| |||||||||||||||||||
Sbjct: 5 gggatgcagccaaggatgacttgccg 30
>48719_mtr-miR169c:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 agccaaggatgacttgccgaca 33
||||||||||||||||||||||
Sbjct: 81 agccaaggatgacttgccgaca 60
>48718_mtr-miR169b:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgaca 33
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgaca 43
>48717_mtr-miR169a:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgaca 33
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgaca 43
>55021_zma-miR169s:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgac 32
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgac 22
>55019_zma-miR169q:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatta 36
||||||||||||||||||| |||||
Sbjct: 6 agccaaggatgacttgccggcatta 30
>54809_vvi-miR169g:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgac 32
|||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgac 34
>54803_vvi-miR169a:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 agtgggatgaagccaaggatgacttgccg 30
||||| ||| |||||||||||||||||||
Sbjct: 4 agtggaatgcagccaaggatgacttgccg 32
>54367_ptr-miR169a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgac 32
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgac 22
>50631_osa-miRf11416-akr:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 ggatgaagccaaggatgacttgccg 30
||||| |||||||||||||||||||
Sbjct: 128 ggatgcagccaaggatgacttgccg 104
>50630_osa-miRf11415-akr:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 ggatgaagccaaggatgacttgccg 30
||||| |||||||||||||||||||
Sbjct: 17 ggatgcagccaaggatgacttgccg 41
>48891_osa-miR169p:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 ggatgaagccaaggatgacttgccg 30
||||| |||||||||||||||||||
Sbjct: 121 ggatgcagccaaggatgacttgccg 97
>48640_gso-miR169g*:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatta 36
||||||||||||||||||| |||||
Sbjct: 1 agccaaggatgacttgccggcatta 25
>48639_gso-miR169a:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatta 36
||||||||||||||||||| |||||
Sbjct: 2 agccaaggatgacttgccggcatta 26
>48564_gma-miR169p:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatta 36
||||||||||||||||||| |||||
Sbjct: 2 agccaaggatgacttgccggcatta 26
>48310_bdi-miR169b:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 agtgggatgaagccaaggatgacttgccg 30
||||| ||| |||||||||||||||||||
Sbjct: 10 agtggaatgtagccaaggatgacttgccg 38
>46859_ama-miR169:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgac 32
|||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgccgac 35
>55023_zma-miR169u:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>55022_zma-miR169t:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>55004_zma-miR169b:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>55003_zma-miR169a:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>54819_vvi-miR169q:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 13 agccaaggatgacttgccggcatt 36
>54549_sly-miR169c:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccga 61
>54437_sbi-miR169a:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>51673_ptc-miR169p:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gaagccaaggatgacttgcc 29
||||||||||||||||||||
Sbjct: 10 gaagccaaggatgacttgcc 29
>51672_ptc-miR169o:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gaagccaaggatgacttgcc 29
||||||||||||||||||||
Sbjct: 10 gaagccaaggatgacttgcc 29
>51664_ptc-miR169g:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 12 agccaaggatgacttgccggcatt 35
>51661_ptc-miR169d:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 12 agccaaggatgacttgccggcatt 35
>48876_osa-miR169a:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 39 agccaaggatgacttgccga 58
>48562_gma-miR169b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>48561_gma-miR169a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccg 30
|||| |||||||||||||||||||
Sbjct: 17 gatgcagccaaggatgacttgccg 40
>48351_bna-miR169b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccga 38
>48350_bna-miR169a:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccga 39
>46964_ath-miR169e:pmrd
Length = 217
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccga 90
>46963_ath-miR169d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62
>46960_ath-miR169a:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccga 38
