miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49004_osa-miR442:pmrd
          Length = 233

 Score =  141 bits (71), Expect = 2e-34
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                       
Query: 32  taaactgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttacttga 91
           ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||  |
Sbjct: 175 taaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgtttactgta 116

                                                                      
Query: 92  gcaccacattgtcaaatcaagacgtaattagactcaaaagattcgtctcgcaatttaca 150
           |||||||||||||| |||| |  | |||||| || ||||||||||||||||||||||||
Sbjct: 115 gcaccacattgtcagatcatggagcaattaggcttaaaagattcgtctcgcaatttaca 57



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 32 taaactgcgagacgaatctattaagcctaatt 63
          |||| |||||||||||||| ||||||||||||
Sbjct: 59 taaattgcgagacgaatcttttaagcctaatt 90




>50895_osa-miRf11680-akr:pmrd
          Length = 145

 Score =  127 bits (64), Expect = 3e-30
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                       
Query: 32  taaactgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttacttga 91
           ||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||||||| |
Sbjct: 130 taaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgtttacttta 71

                                                                       
Query: 92  gcaccacattgtcaaatcaagacgtaattagactcaaaagattcgtctcgcaatttacat 151
           ||||||||||||||||| | |  | |||||| || ||||||| |||||||||||||||| 
Sbjct: 70  gcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgcaatttacac 11

               
Query: 152 gcaa 155
           ||||
Sbjct: 10  gcaa 7



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 32 taaactgcgagacgaatctattaagcctaatt 63
          |||| ||||||||| |||| ||||||||||||
Sbjct: 14 taaattgcgagacggatcttttaagcctaatt 45




>49008_osa-miR445a:pmrd
          Length = 268

 Score =  109 bits (55), Expect = 7e-25
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                       
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttacttgagcac 95
           ||||||||||||| | ||||||||||||||| | | ||||| ||| |||||||  |||| 
Sbjct: 80  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcat 139

                                                          
Query: 96  cacattgtcaaatcaagacgtaattagactcaaaagattcgtctcgc 142
           ||||||||||||||| |  ||||||||||||||||||||||||||||
Sbjct: 140 cacattgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186




>50516_osa-miRf11301-akr:pmrd
          Length = 139

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                              
Query: 116 taattagactcaaaagattcgtctcgcaatttacatgcaaactgtgcaatt 166
           ||||||| ||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 43  taattaggctcaaaagattcgtctcgcgatttccatgcaaactgtgcaatt 93




>50149_osa-miRf10934-akr:pmrd
          Length = 143

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 85/103 (82%)
 Strand = Plus / Minus

                                                                       
Query: 45  gaatctattaagcctaattaattcgtcattatcaaatgtttacttgagcaccacattgtc 104
           |||| ||| ||||||||||||| |||||||| |||||||||| |  | ||| ||||||| 
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57

                                                      
Query: 105 aaatcaagacgtaattagactcaaaagattcgtctcgcaattt 147
           |||| | | || |||||| |  |||||||||||||||| ||||
Sbjct: 56  aaattatggcgcaattaggcctaaaagattcgtctcgcgattt 14




>51304_osa-miRf12089-akr:pmrd
          Length = 120

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 116 taattagactcaaaagattcgtctcgcaattt 147
           ||||||||||||||||||||||||||| ||||
Sbjct: 87  taattagactcaaaagattcgtctcgcgattt 118



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 41 agacgaatctattaagcctaattaattcgtcatta 75
          |||||||||| || |||||||||||||||||||||
Sbjct: 11 agacgaatcttttgagcctaattaattcgtcatta 45



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 116 taattagactcaaaagattcgtct 139
           ||||||| ||||||||||||||||
Sbjct: 34  taattaggctcaaaagattcgtct 11




>49015_osa-miR445h:pmrd
          Length = 277

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 115 gtaattagactcaaaagattcgtctcgc 142
           ||||||||||||||||||||||||||||
Sbjct: 155 gtaattagactcaaaagattcgtctcgc 182



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttact 88
           ||||||||||||| | ||||||||||||||| | | ||||| ||| |||||||
Sbjct: 93  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttact 145




>49013_osa-miR445f:pmrd
          Length = 305

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 115 gtaattagactcaaaagattcgtctcgc 142
           ||||||||||||||||||||||||||||
Sbjct: 170 gtaattagactcaaaagattcgtctcgc 197



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttact 88
           ||||| ||||||| | ||||||||||||||| | | ||||| ||| |||||||
Sbjct: 108 ctgcgggacgaattttttaagcctaattaatccataattatgaaaagtttact 160




>49012_osa-miR445e:pmrd
          Length = 265

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 115 gtaattagactcaaaagattcgtctcgc 142
           ||||||||||||||||||||||||||||
Sbjct: 149 gtaattagactcaaaagattcgtctcgc 176



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttact 88
           ||||||||||||| | ||||||||||||||| | | ||||| ||| |||||||
Sbjct: 87  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttact 139




>49009_osa-miR445b:pmrd
          Length = 264

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 115 gtaattagactcaaaagattcgtctcgc 142
           ||||||||||||||||||||||||||||
Sbjct: 148 gtaattagactcaaaagattcgtctcgc 175



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttact 88
           ||||||||||||  | ||||||||||||||| | | ||||| ||| |||||||
Sbjct: 86  ctgcgagacgaactttttaagcctaattaatccataattatgaaaagtttact 138




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                     
Query: 33 aaactgcgagacgaatctattaagcctaattaattcgtcatta 75
          |||| ||||||||||||| || |||||||||||| ||||||||
Sbjct: 3  aaaccgcgagacgaatcttttgagcctaattaatccgtcatta 45



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 116 taattagactcaaaagattcgtctcgc 142
           ||||||| |||||||||||||||||||
Sbjct: 34  taattaggctcaaaagattcgtctcgc 8



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 38  gcgagacgaatctattaagcctaatta 64
           ||||||||||||| |||||||||||||
Sbjct: 116 gcgagacgaatcttttaagcctaatta 90



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 116 taattagactcaaaagattcgtctcgcaattt 147
           ||||||| || |||||||||||||||| ||||
Sbjct: 90  taattaggcttaaaagattcgtctcgcgattt 121




>51000_osa-miRf11785-akr:pmrd
          Length = 128

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 116 taattagactcaaaagattcgtctcgcaatttacatgc 153
           ||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 91  taattaggctcaaaagatttgtctcgcgatttacatgc 128



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                     
Query: 33 aaactgcgagacgaatctattaagcctaattaattcgtcatta 75
          |||| ||||||||||||| || |||||||||||  ||||||||
Sbjct: 7  aaaccgcgagacgaatcttttgagcctaattaagccgtcatta 49



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 116 taattagactcaaaagattcgtctcgc 142
           ||||||| |||||||||||||||||||
Sbjct: 38  taattaggctcaaaagattcgtctcgc 12




>49014_osa-miR445g:pmrd
          Length = 275

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttact 88
           ||||||||||||| | ||||||||||||||| | | ||||| ||| |||||||
Sbjct: 92  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttact 144



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 115 gtaattagactcaaaagattcgtct 139
           ||||||| |||||||||||||||||
Sbjct: 154 gtaattaaactcaaaagattcgtct 178




>49010_osa-miR445c:pmrd
          Length = 260

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 36  ctgcgagacgaatctattaagcctaattaattcgtcattatcaaatgtttact 88
           ||||||||||||| | ||||||||||||||| | | ||||| ||| |||||||
Sbjct: 85  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttact 137



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 39  cgagacgaatctattaagcctaatta 64
           |||||||||||| |||||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaatta 148




>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 33  aaactgcgagacgaatctattaagcctaattaattcgtcatta 75
           |||| |||||| |||||| || |||||||||||| ||||||||
Sbjct: 119 aaaccgcgagatgaatctcttgagcctaattaatccgtcatta 77



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 116 taattagactcaaaagattcgtct 139
           ||||||| ||||||||||||||||
Sbjct: 35  taattaggctcaaaagattcgtct 12




>49733_osa-miRf10518-akr:pmrd
          Length = 122

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                     
Query: 33 aaactgcgagacgaatctattaagcctaattaattcgtcatta 75
          |||| ||||||||||||| || |||||||||||  ||||||||
Sbjct: 4  aaaccgcgagacgaatcttttgagcctaattaagccgtcatta 46



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 116 taattagactcaaaagattcgtctcgc 142
           ||||||| |||||||||||||||||||
Sbjct: 35  taattaggctcaaaagattcgtctcgc 9



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 116 taattagactcaaaagattcgtctcg 141
           ||||||| ||||||||||||||||||
Sbjct: 88  taattaggctcaaaagattcgtctcg 113




>49455_osa-miRf10240-akr:pmrd
          Length = 128

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 33  aaactgcgagacgaatctattaagcctaattaattcgtcatta 75
           |||| ||||||||||||| || |||||||||||| ||| ||||
Sbjct: 122 aaaccgcgagacgaatcttttgagcctaattaatccgttatta 80



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 116 taattagactcaaaagattcgtctcgc 142
           ||||||| |||||||||||||||||||
Sbjct: 91  taattaggctcaaaagattcgtctcgc 117



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 116 taattagactcaaaagattcgtctc 140
           ||||||| |||||||||||||||||
Sbjct: 38  taattaggctcaaaagattcgtctc 14




>50155_osa-miRf10940-akr:pmrd
          Length = 96

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 116 taattagactcaaaagattcgtctcg 141
           ||||||||||||||||||| ||||||
Sbjct: 28  taattagactcaaaagatttgtctcg 3




>51205_osa-miRf11990-akr:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 38 gcgagacgaatctattaagcctaattaat 66
          ||||||| |||||||| ||||||||||||
Sbjct: 11 gcgagacaaatctattgagcctaattaat 39




>49652_osa-miRf10437-akr:pmrd
          Length = 120

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 116 taattagactcaaaagattcgtctcgcaattt 147
           ||||||| ||||||||||| ||||||| ||||
Sbjct: 34  taattaggctcaaaagatttgtctcgcgattt 3