miRNEST 2.0, an integrative microRNA resource :: BLAST
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 186 bits (94), Expect = 5e-48
Identities = 115/122 (94%)
Strand = Plus / Plus
Query: 45 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccataagtgctaca 104
|||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||
Sbjct: 5 ggaaatcatgagacgaatcttttgagcctaattagtatatgattaaccataagtgctaca 64
Query: 105 gtaacccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 164
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ataacccacatgtgctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
Query: 165 ag 166
||
Sbjct: 125 ag 126
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtctc 155
|||||||||||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctc 14
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattagc 91
||||||||||||||| |||||||||| ||| | ||||||
Sbjct: 116 cgagacgaatcttttgagcctaattaatccgttattagc 78
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 184 bits (93), Expect = 2e-47
Identities = 116/123 (94%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 45 ggaaatcacgagacgaatcttttaagcctaattagtcc---atgattagccataagtgct 101
||||||| |||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 123 ggaaatcgcgagacgaatcttttaagcctaattagtactacacgattagccataagtgct 64
Query: 102 acagtaacccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtt 161
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 acagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtt 4
Query: 162 tcc 164
|||
Sbjct: 3 tcc 1
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcggtttcc 164
|||||||||| ||||||||||||||||| |||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcgatttcc 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattagc 91
||||||||||||||| |||||||||| ||| | ||||||
Sbjct: 9 cgagacgaatcttttgagcctaattaatccgtcattagc 47
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 182 bits (92), Expect = 7e-47
Identities = 113/120 (94%)
Strand = Plus / Minus
Query: 47 aaatcacgagacgaatcttttaagcctaattagtccatgattagccataagtgctacagt 106
||||| |||||| |||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 122 aaatcgcgagacaaatcttttgagcctaattagttcatgattagccataagtgctacagt 63
Query: 107 aacccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtttccag 166
|||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 62 aacctacatgtgttaatgacggcttaattaggctcaaaagattcgtctcgcggtttccag 3
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcg 158
||||||||||||||||||| ||||||||
Sbjct: 91 taattaggctcaaaagatttgtctcgcg 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaatta 78
||||||||||||||| ||||||||||
Sbjct: 13 cgagacgaatcttttgagcctaatta 38
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 174 bits (88), Expect = 2e-44
Identities = 112/120 (93%)
Strand = Plus / Minus
Query: 45 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccataagtgctaca 104
|||||| |||||||||||||||| ||||||||||||| |||||| |||||| |||||||
Sbjct: 121 ggaaataacgagacgaatcttttgagcctaattagtctgtgattaaccataaatgctaca 62
Query: 105 gtaacccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 164
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaacccacatgtactaatgacggcttaattaggctcaaaagattcgtctcgcggtttcc 2
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcg 156
||||||||||||||||||||||||||
Sbjct: 88 taattaggctcaaaagattcgtctcg 113
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaatta 78
||||||||||||||| ||||||||||
Sbjct: 10 cgagacgaatcttttgagcctaatta 35
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 163 bits (82), Expect = 7e-41
Identities = 103/110 (93%)
Strand = Plus / Plus
Query: 55 agacgaatcttttaagcctaattagtccatgattagccataagtgctacagtaacccaca 114
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 12 agacgaatcttttgagcctaattagtccatgattagttataagtgctacagtaacccgta 71
Query: 115 tgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 164
||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 72 tgtgctaatgacggattaattaggctcaagagattcatctcgcggtttcc 121
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 131 taattaggctcaaaagattcgtct 154
||||||||||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtct 12
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 159 bits (80), Expect = 1e-39
Identities = 110/120 (91%)
Strand = Plus / Plus
Query: 45 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccataagtgctaca 104
||||||| |||||| |||||||| |||||||||||||||||||||||||||| ||||| |
Sbjct: 1 ggaaatcgcgagacaaatcttttgagcctaattagtccatgattagccataaatgctata 60
Query: 105 gtaacccacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 164
|||||||| || | ||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 61 gtaacccaaatatactaatgatggattaattatgctcaaaagattcgtctcgcggtttcc 120
Score = 54.0 bits (27), Expect = 4e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 118 gctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 164
|||||| | ||| ||||||||||||||||||| |||||||| |||||
Sbjct: 47 gctaatcatggactaattaggctcaaaagatttgtctcgcgatttcc 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattag 90
||||||||||||||| ||| |||||| ||||| |||||
Sbjct: 112 cgagacgaatcttttgagcataattaatccatcattag 75
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 155 bits (78), Expect = 2e-38
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 45 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccataagtgctaca 104
||||||| ||||||||||||||| || |||||||| |||||||| ||||||||||||| |
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaattagcccatgatttgccataagtgctata 61
Query: 105 gtaacccacatgtgctaatgacggattaattaggctcaaaagattcgtct 154
| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 60 gcaacccacatgtgctaatgacgaattaattaggctcaaaagattcgtct 11
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 ggaaatcacgagacgaatcttttaagcctaatta 78
||||||||| ||||||||||||| ||||||||||
Sbjct: 1 ggaaatcacaagacgaatcttttgagcctaatta 34
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcggtttcc 164
||||||| |||||||||||||||||||| |||||
Sbjct: 87 taattagactcaaaagattcgtctcgcgatttcc 120
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 113 bits (57), Expect = 5e-26
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 45 ggaaatcacgagacgaatcttttaagcctaattagtccatgattagccataagtgctaca 104
||||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||
Sbjct: 76 ggaaatcgcgagacgaatcttttgagcctaattagtctatgattaaccataagtgctaca 17
Query: 105 gtaacccacatgt 117
|||||||||||||
Sbjct: 16 gtaacccacatgt 4
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcggtttcca 165
|||||||||||||||||||||||||||| ||||||
Sbjct: 43 taattaggctcaaaagattcgtctcgcgatttcca 77
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 tgattagccataagtgctacagtaacccacatgtgct 120
|||||| ||||| |||||| |||||||||||||||||
Sbjct: 103 tgattaaccataggtgctatagtaacccacatgtgct 139
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 91.7 bits (46), Expect = 2e-19
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 51 cacgagacgaatcttttaagcctaattagtccatgattagccataagtgctacagtaacc 110
|||||||| |||||||| || ||||||||||||||||||||||||||||||| || ||||
Sbjct: 1 cacgagacaaatcttttgagtctaattagtccatgattagccataagtgctatagcaacc 60
Query: 111 cacatg 116
||||||
Sbjct: 61 cacatg 66
>49004_osa-miR442:pmrd
Length = 233
Score = 75.8 bits (38), Expect = 1e-14
Identities = 100/119 (84%), Gaps = 5/119 (4%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattagccataa--gtgctacagtaacc 110
||||||||||||||||||||||||| |||||||| | || ||||||||||||
Sbjct: 66 cgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagtaa-- 123
Query: 111 cacatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggtttccagacg 169
|||| |||||||||||||||||||||||| || | ||||||||||| |||| ||||||
Sbjct: 124 -acatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttacagacg 181
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 132 aattaggctcaaaagattcgtctcgc 157
||||||||| ||||||||||||||||
Sbjct: 90 aattaggcttaaaagattcgtctcgc 65
>49010_osa-miR445c:pmrd
Length = 260
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 50 tcacgagacgaatcttttaagcctaattagtccatgattag 90
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 176 tcacgagacgaatcttttaagcctaattacaccatgattag 136
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatta 89
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 88 cgagacgaattttttaagcctaattaatccataatta 124
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 127 ggattaattaggctcaaaagattcgtctcgc 157
|||||||||||||| |||| |||||||||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtctcgc 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcg 156
|||||||||| |||||||||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcg 173
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 112 acatgtgctaatgacggattaattaggctcaaaagattcgtctcgcggttt 162
|||| ||||||||| |||||||||||||| || | ||||||||||||||||
Sbjct: 79 acatttgctaatgatggattaattaggcttaataaattcgtctcgcggttt 129
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattagc 91
|||||||||| | ||||||||||||| ||||| ||||||
Sbjct: 123 cgagacgaatttattaagcctaattaatccatcattagc 85
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 43 caggaaatcacgagacgaatcttttaagcctaatt 77
||||||||| |||||||||||||||| ||||||||
Sbjct: 10 caggaaatcgcgagacgaatcttttaggcctaatt 44
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 112 acatgtgctaatgacggattaattaggct 140
|||| ||||||||||||||||||||||||
Sbjct: 78 acatttgctaatgacggattaattaggct 106
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 132 aattaggctcaaaagattcgtctcgcggtttcc 164
|||||||| ||||||||||||||||| |||||
Sbjct: 44 aattaggcctaaaagattcgtctcgcgatttcc 12
>49015_osa-miR445h:pmrd
Length = 277
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatta 89
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 96 cgagacgaattttttaagcctaattaatccataatta 132
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcg 158
||||||| ||||||||||||||||||||
Sbjct: 156 taattagactcaaaagattcgtctcgcg 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 127 ggattaattaggctcaaaagattcgtctcgc 157
|||||||||||||| |||| |||||||||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtctcgc 95
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattag 90
||||||||||||||| || ||||||| ||||||||||
Sbjct: 181 cgagacgaatcttttgagtctaattacaccatgattag 144
>49014_osa-miR445g:pmrd
Length = 275
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatta 89
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 95 cgagacgaattttttaagcctaattaatccataatta 131
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 127 ggattaattaggctcaaaagattcgtctcgc 157
|||||||||||||| |||| |||||||||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtctcgc 94
>49012_osa-miR445e:pmrd
Length = 265
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatta 89
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 90 cgagacgaattttttaagcctaattaatccataatta 126
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcg 158
||||||| ||||||||||||||||||||
Sbjct: 150 taattagactcaaaagattcgtctcgcg 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 127 ggattaattaggctcaaaagattcgtctcgc 157
|||||||||||||| |||| |||||||||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtctcgc 89
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattag 90
||||||||||||||| || ||||||| ||||||||||
Sbjct: 175 cgagacgaatcttttgagtctaattacaccatgattag 138
>49008_osa-miR445a:pmrd
Length = 268
Score = 50.1 bits (25), Expect = 7e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatta 89
|||||||||| ||||||||||||||| ||||| ||||
Sbjct: 83 cgagacgaattttttaagcctaattaatccataatta 119
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcg 158
||||||| ||||||||||||||||||||
Sbjct: 160 taattagactcaaaagattcgtctcgcg 187
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 127 ggattaattaggctcaaaagattcgtctcgc 157
|||||||||||||| |||| |||||||||||
Sbjct: 112 ggattaattaggcttaaaaaattcgtctcgc 82
Score = 40.1 bits (20), Expect = 7e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatt 88
||||||||||||||| || ||||||| ||||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatt 150
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 127 ggattaattaggctcaaaagattcgtctcgcg 158
||||||||||||||||| ||||| ||||||||
Sbjct: 41 ggattaattaggctcaatagatttgtctcgcg 10
>49013_osa-miR445f:pmrd
Length = 305
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcg 158
||||||| ||||||||||||||||||||
Sbjct: 171 taattagactcaaaagattcgtctcgcg 198
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 56 gacgaatcttttaagcctaattagtccatgatta 89
||||||| ||||||||||||||| ||||| ||||
Sbjct: 114 gacgaattttttaagcctaattaatccataatta 147
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattag 90
||||||||||||||| || ||||||| ||||||||||
Sbjct: 196 cgagacgaatcttttgagtctaattacaccatgattag 159
>49009_osa-miR445b:pmrd
Length = 264
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 131 taattaggctcaaaagattcgtctcgcg 158
||||||| ||||||||||||||||||||
Sbjct: 149 taattagactcaaaagattcgtctcgcg 176
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 53 cgagacgaatcttttaagcctaattagtccatgattag 90
||||||||||||||| || ||||||| ||||||||||
Sbjct: 174 cgagacgaatcttttgagtctaattacaccatgattag 137
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 53 cgagacgaatcttttaagcctaattagtccatgatta 89
||||||||| ||||||||||||||| ||||| ||||
Sbjct: 89 cgagacgaactttttaagcctaattaatccataatta 125
