miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 174 bits (88), Expect = 1e-44
Identities = 118/128 (92%)
Strand = Plus / Minus
Query: 4 atccgcctataaaatgcgagacgaatctattaagtctaattaatccgtcattagcaaatg 63
||||| || |||| |||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 184 atccgtctgtaaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatg 125
Query: 64 tttactgtagcaccacattgtcaaatcatggcataattaggctcaaaagattcgtctcgc 123
||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||
Sbjct: 124 tttactgtagcaccacattgtcagatcatggagcaattaggcttaaaagattcgtctcgc 65
Query: 124 aatttaca 131
||||||||
Sbjct: 64 aatttaca 57
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 13 taaaatgcgagacgaatctattaagtctaatt 44
|||| |||||||||||||| ||||| ||||||
Sbjct: 59 taaattgcgagacgaatcttttaagcctaatt 90
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 151 bits (76), Expect = 2e-37
Identities = 115/128 (89%)
Strand = Plus / Minus
Query: 4 atccgcctataaaatgcgagacgaatctattaagtctaattaatccgtcattagcaaatg 63
|||||||| |||| ||||||||||| ||||||| ||||||||||| |||||||||||||
Sbjct: 139 atccgcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatg 80
Query: 64 tttactgtagcaccacattgtcaaatcatggcataattaggctcaaaagattcgtctcgc 123
|||||| ||||||||||||||||||| |||| ||||||||| ||||||| ||||||||
Sbjct: 79 tttactttagcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgc 20
Query: 124 aatttaca 131
||||||||
Sbjct: 19 aatttaca 12
>49008_osa-miR445a:pmrd
Length = 268
Score = 115 bits (58), Expect = 9e-27
Identities = 94/106 (88%)
Strand = Plus / Plus
Query: 18 tgcgagacgaatctattaagtctaattaatccgtcattagcaaatgtttactgtagcacc 77
|||||||||||| | ||||| ||||||||||| | |||| ||| ||||||||||||| |
Sbjct: 81 tgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcatc 140
Query: 78 acattgtcaaatcatggcataattaggctcaaaagattcgtctcgc 123
||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 141 acattgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgca 124
|||||||||| |||| ||||||||||||
Sbjct: 108 taattaggcttaaaaaattcgtctcgca 81
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 101 bits (51), Expect = 1e-22
Identities = 90/103 (87%)
Strand = Plus / Minus
Query: 26 gaatctattaagtctaattaatccgtcattagcaaatgtttactgtagcaccacattgtc 85
|||| ||| ||| ||||||||||||||||||||||||||||| |||| ||| |||||||
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57
Query: 86 aaatcatggcataattaggctcaaaagattcgtctcgcaattt 128
|||| ||||| |||||||| |||||||||||||||| ||||
Sbjct: 56 aaattatggcgcaattaggcctaaaagattcgtctcgcgattt 14
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 97 taattaggctcaaaagattcgtctcgcaatttacatgtaaactg 140
||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct: 43 taattaggctcaaaagattcgtctcgcgatttccatgcaaactg 86
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 61.9 bits (31), Expect = 1e-10
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 19 gcgagacgaatctattaagtctaattaatccgtcattagcaaatgt---ttactgtagca 75
||||||||||||| || || ||||||||||||||||||||| |||| |||||||||||
Sbjct: 8 gcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattactgtagca 67
Query: 76 c 76
|
Sbjct: 68 c 68
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgc 123
|||||||||||||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtctcgc 8
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 97 taattaggctcaaaagattcgtctcgcaattt 128
|||||||||| |||||||||||||||| ||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcgattt 121
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 97 taattaggctcaaaagattcgtctcgcaatttacatg 133
||||||||||||||||||| ||||||| |||||||||
Sbjct: 91 taattaggctcaaaagatttgtctcgcgatttacatg 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgc 123
|||||||||||||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctcgc 12
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 56.0 bits (28), Expect = 7e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 85 caaatcatggcataattaggctcaaaagattcgtctcgcaattt 128
|||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 75 caaatcatgggctaattagactcaaaagattcgtctcgcgattt 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtct 120
||||||||||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtct 11
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgc 123
|||||||||||||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtctcgc 9
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 97 taattaggctcaaaagattcgtctcg 122
||||||||||||||||||||||||||
Sbjct: 88 taattaggctcaaaagattcgtctcg 113
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 19 gcgagacgaatctattaagtctaattaatccgtcattag 57
||||||||||||| || || |||||||| ||||||||||
Sbjct: 9 gcgagacgaatcttttgagcctaattaagccgtcattag 47
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 97 taattaggctcaaaagattcgtctcgc 123
|||||||||||||||||||||||||||
Sbjct: 91 taattaggctcaaaagattcgtctcgc 117
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 19 gcgagacgaatctattaagtctaattaatccgtcattagcaaatgt 64
||||||||||||| || || ||||||||||||| ||||||| ||||
Sbjct: 117 gcgagacgaatcttttgagcctaattaatccgttattagcacatgt 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctc 121
|||||||||||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctc 14
>49011_osa-miR445d:pmrd
Length = 312
Score = 54.0 bits (27), Expect = 3e-08
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 33 ttaagtctaattaatccgtcattagcaaatgtttactgtagcaccacattgtcaaatcat 92
||||| ||||||||||| | |||| || ||||||| ||||||| ||||| | | ||||||
Sbjct: 193 ttaagcctaattaatccataattaacacatgtttagtgtagcatcacataggctaatcat 134
Query: 93 ggcataattaggctcaaaagattcgtctcgc 123
| ||||||| ||||| |||||| ||||||
Sbjct: 133 tgattaattagactcaatagattcatctcgc 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 gcgagacgaatctattaagtctaattaatc 48
|||||| ||||||||| |||||||||||||
Sbjct: 103 gcgagatgaatctattgagtctaattaatc 132
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 87 aatcatggcataattaggctcaaaagattcgtct 120
|||||||| ||||||||||||||||||||||||
Sbjct: 45 aatcatggactaattaggctcaaaagattcgtct 12
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 19 gcgagacgaatctattaagtctaattaatccgtcattagca 59
|||||| |||||| || || |||||||||||||||||||||
Sbjct: 114 gcgagatgaatctcttgagcctaattaatccgtcattagca 74
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcgcaattt 128
|||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 44 aatcatggactaattaggctcaaaagatttgtctcgcgattt 3
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 97 taattaggctcaaaagattcgtctcgc 123
|||||| ||||||||||||||||||||
Sbjct: 87 taattatgctcaaaagattcgtctcgc 113
>49015_osa-miR445h:pmrd
Length = 277
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcgc 123
|||||||| ||||||| |||||||||||||||||||
Sbjct: 146 aatcatggtgtaattagactcaaaagattcgtctcgc 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 18 tgcgagacgaatctattaagtctaattaatcc 49
|||||||||||| | ||||| |||||||||||
Sbjct: 94 tgcgagacgaattttttaagcctaattaatcc 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgca 124
|||||||||| |||| ||||||||||||
Sbjct: 121 taattaggcttaaaaaattcgtctcgca 94
>49013_osa-miR445f:pmrd
Length = 305
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcgc 123
|||||||| ||||||| |||||||||||||||||||
Sbjct: 161 aatcatggtgtaattagactcaaaagattcgtctcgc 197
>49012_osa-miR445e:pmrd
Length = 265
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcgc 123
|||||||| ||||||| |||||||||||||||||||
Sbjct: 140 aatcatggtgtaattagactcaaaagattcgtctcgc 176
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 18 tgcgagacgaatctattaagtctaattaatcc 49
|||||||||||| | ||||| |||||||||||
Sbjct: 88 tgcgagacgaattttttaagcctaattaatcc 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgca 124
|||||||||| |||| ||||||||||||
Sbjct: 115 taattaggcttaaaaaattcgtctcgca 88
>49009_osa-miR445b:pmrd
Length = 264
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcgc 123
|||||||| ||||||| |||||||||||||||||||
Sbjct: 139 aatcatggtgtaattagactcaaaagattcgtctcgc 175
>49010_osa-miR445c:pmrd
Length = 260
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcg 122
|||||||| |||||||||| |||||||||||||||
Sbjct: 138 aatcatggtgtaattaggcttaaaagattcgtctcg 173
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 18 tgcgagacgaatctattaagtctaattaatcc 49
|||||||||||| | ||||| |||||||||||
Sbjct: 86 tgcgagacgaattttttaagcctaattaatcc 117
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgca 124
|||||||||| |||| ||||||||||||
Sbjct: 113 taattaggcttaaaaaattcgtctcgca 86
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcgc 123
|||||||| ||||||||||||| ||||| |||||||
Sbjct: 47 aatcatggattaattaggctcaatagatttgtctcgc 11
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 87 aatcatggcataattaggctcaaaagattcgtctcg 122
|||||||| ||||||| ||||||||||| ||||||
Sbjct: 38 aatcatggactaattagactcaaaagatttgtctcg 3
>49014_osa-miR445g:pmrd
Length = 275
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 18 tgcgagacgaatctattaagtctaattaatcc 49
|||||||||||| | ||||| |||||||||||
Sbjct: 93 tgcgagacgaattttttaagcctaattaatcc 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 97 taattaggctcaaaagattcgtctcgca 124
|||||||||| |||| ||||||||||||
Sbjct: 120 taattaggcttaaaaaattcgtctcgca 93
