miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 236 bits (119), Expect = 5e-63
Identities = 146/155 (94%)
Strand = Plus / Minus
Query: 1 tagactaataacaaaacaaattacatattccgcctgtaaactgcgagacgaatctattaa 60
||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||
Sbjct: 211 tagactaataacaaaacaaattacagaatccgtctgtaaactgcgagacgaatttattaa 152
Query: 61 gcctaattaatccgtcattagcaaatgtttactgtagcatcacattgtcaaatcatggcg 120
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
Sbjct: 151 gcctaattaatccgtcattagcaaatgtttactgtagcaccacattgtcagatcatggag 92
Query: 121 taattaggctcaaaagattcgtctcgcaatttaca 155
||||||||| ||||||||||||||||||||||||
Sbjct: 91 caattaggcttaaaagattcgtctcgcaatttaca 57
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 35 tgtaaactgcgagacgaatctattaagcctaatt 68
|||||| |||||||||||||| ||||||||||||
Sbjct: 57 tgtaaattgcgagacgaatcttttaagcctaatt 90
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 174 bits (88), Expect = 2e-44
Identities = 121/132 (91%)
Strand = Plus / Minus
Query: 29 tccgcctgtaaactgcgagacgaatctattaagcctaattaatccgtcattagcaaatgt 88
||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 138 tccgcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgt 79
Query: 89 ttactgtagcatcacattgtcaaatcatggcgtaattaggctcaaaagattcgtctcgca 148
||||| ||||| ||||||||||||| |||| | ||||||||| ||||||| |||||||||
Sbjct: 78 ttactttagcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctcgca 19
Query: 149 atttacatgcaa 160
||||||| ||||
Sbjct: 18 atttacacgcaa 7
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 35 tgtaaactgcgagacgaatctattaagcctaatt 68
|||||| ||||||||| |||| ||||||||||||
Sbjct: 12 tgtaaattgcgagacggatcttttaagcctaatt 45
>49008_osa-miR445a:pmrd
Length = 268
Score = 141 bits (71), Expect = 2e-34
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatccgtcattagcaaatgtttactgtagcat 100
||||||||||||| | ||||||||||||||||| | |||| ||| ||||||||||||||
Sbjct: 80 ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcat 139
Query: 101 cacattgtcaaatcatggcgtaattaggctcaaaagattcgtctcgc 147
|||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 140 cacattgtcaaatcatggtgtaattagactcaaaagattcgtctcgc 186
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgca 148
|||||||||| |||| ||||||||||||
Sbjct: 108 taattaggcttaaaaaattcgtctcgca 81
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 109 bits (55), Expect = 8e-25
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 50 gaatctattaagcctaattaatccgtcattagcaaatgtttactgtagcatcacattgtc 109
|||| ||| ||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57
Query: 110 aaatcatggcgtaattaggctcaaaagattcgtctcgcaattt 152
|||| |||||| |||||||| |||||||||||||||| ||||
Sbjct: 56 aaattatggcgcaattaggcctaaaagattcgtctcgcgattt 14
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 85.7 bits (43), Expect = 1e-17
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 121 taattaggctcaaaagattcgtctcgcaatttacatgcaaactgtgcaatt 171
||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 43 taattaggctcaaaagattcgtctcgcgatttccatgcaaactgtgcaatt 93
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 71.9 bits (36), Expect = 2e-13
Identities = 109/130 (83%), Gaps = 5/130 (3%)
Strand = Plus / Plus
Query: 32 gcctgtaaactgcgagacgaatctattaagcctaattaatccgtcattagcaaatgt--- 88
||||| |||| ||||||||||||| || ||||||||||| ||||||||| || ||||
Sbjct: 1 gcctggaaaccgcgagacgaatcttttgagcctaattaagccgtcattaacacatgtagg 60
Query: 89 ttactgtagcatcacattgtcaaatcatggcgtaattaggctcaaaagattcgtctcgca 148
||||||||||| | || | | ||||||| ||||||||||||||||||| |||||||
Sbjct: 61 ttactgtagca-cttatgg-ctaatcatgaactaattaggctcaaaagatttgtctcgcg 118
Query: 149 atttacatgc 158
||||||||||
Sbjct: 119 atttacatgc 128
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgc 147
|||||||||||||||||||||||||||
Sbjct: 38 taattaggctcaaaagattcgtctcgc 12
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 69.9 bits (35), Expect = 7e-13
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 38 aaactgcgagacgaatctattaagcctaattaatccgtcattagcaaatgt 88
|||| ||||||||||||| || |||||||||||||||||||||||| ||||
Sbjct: 3 aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgt 53
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgc 147
|||||||||||||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtctcgc 8
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 43 gcgagacgaatctattaagcctaatta 69
||||||||||||| |||||||||||||
Sbjct: 116 gcgagacgaatcttttaagcctaatta 90
>49011_osa-miR445d:pmrd
Length = 312
Score = 69.9 bits (35), Expect = 7e-13
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 57 ttaagcctaattaatccgtcattagcaaatgtttactgtagcatcacattgtcaaatcat 116
||||||||||||||||| | |||| || ||||||| ||||||||||||| | | ||||||
Sbjct: 193 ttaagcctaattaatccataattaacacatgtttagtgtagcatcacataggctaatcat 134
Query: 117 ggcgtaattaggctcaaaagattcgtctcgc 147
| ||||||| ||||| |||||| ||||||
Sbjct: 133 tgattaattagactcaatagattcatctcgc 103
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 65.9 bits (33), Expect = 1e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 32 gcctgtaaactgcgagacgaatctattaagcctaattaatccgtcattagcaaatgt 88
||||| |||| ||||||||||||| || |||||||||||||||| ||||||| ||||
Sbjct: 128 gcctggaaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgt 72
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 121 taattaggctcaaaagattcgtctcgc 147
|||||||||||||||||||||||||||
Sbjct: 91 taattaggctcaaaagattcgtctcgc 117
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 38 aaactgcgagacgaatctattaagcctaattaatccgtcattagca 83
|||| |||||| |||||| || ||||||||||||||||||||||||
Sbjct: 119 aaaccgcgagatgaatctcttgagcctaattaatccgtcattagca 74
>49015_osa-miR445h:pmrd
Length = 277
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcgc 147
|||||||| |||||||| |||||||||||||||||||
Sbjct: 146 aatcatggtgtaattagactcaaaagattcgtctcgc 182
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatcc 73
||||||||||||| | |||||||||||||||||
Sbjct: 93 ctgcgagacgaattttttaagcctaattaatcc 125
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgca 148
|||||||||| |||| ||||||||||||
Sbjct: 121 taattaggcttaaaaaattcgtctcgca 94
>49013_osa-miR445f:pmrd
Length = 305
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcgc 147
|||||||| |||||||| |||||||||||||||||||
Sbjct: 161 aatcatggtgtaattagactcaaaagattcgtctcgc 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatcc 73
||||| ||||||| | |||||||||||||||||
Sbjct: 108 ctgcgggacgaattttttaagcctaattaatcc 140
>49012_osa-miR445e:pmrd
Length = 265
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcgc 147
|||||||| |||||||| |||||||||||||||||||
Sbjct: 140 aatcatggtgtaattagactcaaaagattcgtctcgc 176
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatcc 73
||||||||||||| | |||||||||||||||||
Sbjct: 87 ctgcgagacgaattttttaagcctaattaatcc 119
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgca 148
|||||||||| |||| ||||||||||||
Sbjct: 115 taattaggcttaaaaaattcgtctcgca 88
>49009_osa-miR445b:pmrd
Length = 264
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcgc 147
|||||||| |||||||| |||||||||||||||||||
Sbjct: 139 aatcatggtgtaattagactcaaaagattcgtctcgc 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatcc 73
|||||||||||| | |||||||||||||||||
Sbjct: 86 ctgcgagacgaactttttaagcctaattaatcc 118
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 109 caaatcatggcgtaattaggctcaaaagattcgtctcgcaattt 152
|||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 75 caaatcatgggctaattagactcaaaagattcgtctcgcgattt 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtct 144
||||||||||||||||||||||||
Sbjct: 34 taattaggctcaaaagattcgtct 11
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 56.0 bits (28), Expect = 1e-08
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 38 aaactgcgagacgaatctattaagcctaattaatccgtcattag 81
|||| ||||||||||||| || ||||||||||| ||||||||||
Sbjct: 4 aaaccgcgagacgaatcttttgagcctaattaagccgtcattag 47
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgc 147
|||||||||||||||||||||||||||
Sbjct: 35 taattaggctcaaaagattcgtctcgc 9
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 121 taattaggctcaaaagattcgtctcg 146
||||||||||||||||||||||||||
Sbjct: 88 taattaggctcaaaagattcgtctcg 113
>49010_osa-miR445c:pmrd
Length = 260
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcg 146
|||||||| ||||||||||| |||||||||||||||
Sbjct: 138 aatcatggtgtaattaggcttaaaagattcgtctcg 173
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatcc 73
||||||||||||| | |||||||||||||||||
Sbjct: 85 ctgcgagacgaattttttaagcctaattaatcc 117
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 44 cgagacgaatctattaagcctaatta 69
|||||||||||| |||||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaatta 148
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgca 148
|||||||||| |||| ||||||||||||
Sbjct: 113 taattaggcttaaaaaattcgtctcgca 86
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcgcaattt 152
|||||||| ||||||||||||||||||| ||||||| ||||
Sbjct: 44 aatcatggactaattaggctcaaaagatttgtctcgcgattt 3
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 38 aaactgcgagacgaatctattaagcctaattaatccgtcattag 81
|||| ||||||||||||| || ||| |||||||||| |||||||
Sbjct: 118 aaaccgcgagacgaatcttttgagcataattaatccatcattag 75
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 121 taattaggctcaaaagattcgtctcgc 147
|||||| ||||||||||||||||||||
Sbjct: 87 taattatgctcaaaagattcgtctcgc 113
>49014_osa-miR445g:pmrd
Length = 275
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 41 ctgcgagacgaatctattaagcctaattaatcc 73
||||||||||||| | |||||||||||||||||
Sbjct: 92 ctgcgagacgaattttttaagcctaattaatcc 124
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtct 144
|||||||| ||||||| ||||||||||||||||
Sbjct: 145 aatcatggtgtaattaaactcaaaagattcgtct 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 121 taattaggctcaaaagattcgtctcgca 148
|||||||||| |||| ||||||||||||
Sbjct: 120 taattaggcttaaaaaattcgtctcgca 93
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 gcgagacgaatctattaagcctaattaatcc 73
||||||| |||||||| ||||||||||||||
Sbjct: 11 gcgagacaaatctattgagcctaattaatcc 41
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcgc 147
|||||||| ||||||||||||| ||||| |||||||
Sbjct: 47 aatcatggattaattaggctcaatagatttgtctcgc 11
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 6e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 111 aatcatggcgtaattaggctcaaaagattcgtctcg 146
|||||||| ||||||| ||||||||||| ||||||
Sbjct: 38 aatcatggactaattagactcaaaagatttgtctcg 3
