miRNEST 2.0, an integrative microRNA resource :: BLAST
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 155 bits (78), Expect = 1e-38
Identities = 111/122 (90%)
Strand = Plus / Plus
Query: 32 gcctggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtgga 91
|||||||||||||||||||||| ||||||| |||||||| ||| ||||| ||||||| |
Sbjct: 1 gcctggaaaccgcgagacgaatcttttgagcctaattaagccgtcattaacacatgtagg 60
Query: 92 ttactgtagcacttatggctaatcatggactaattagacacaaaagattcgtctcgcgat 151
||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||
Sbjct: 61 ttactgtagcacttatggctaatcatgaactaattaggctcaaaagatttgtctcgcgat 120
Query: 152 tt 153
||
Sbjct: 121 tt 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 122 taattagacacaaaagattcgtctcgcgatttcc 155
||||||| | |||||||||||||||||| |||||
Sbjct: 38 taattaggctcaaaagattcgtctcgcggtttcc 5
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 153 bits (77), Expect = 6e-38
Identities = 112/123 (91%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 36 ggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtggattac 95
|||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 1 ggaaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgtggattac 60
Query: 96 tgtagcacttatggctaatcat---ggactaattagacacaaaagattcgtctcgcgatt 152
|||||||||||||||||||| | | ||||||||| | ||||||||||||||||||||
Sbjct: 61 tgtagcacttatggctaatcgtgtagtactaattaggcttaaaagattcgtctcgcgatt 120
Query: 153 tcc 155
|||
Sbjct: 121 tcc 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 109 gctaatcatggactaattagacacaaaagattcgtctcgcgatttcc 155
|||||| | ||| ||||||| | |||||||||||||||||| |||||
Sbjct: 47 gctaatgacggattaattaggctcaaaagattcgtctcgcggtttcc 1
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 143 bits (72), Expect = 5e-35
Identities = 111/124 (89%)
Strand = Plus / Minus
Query: 32 gcctggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtgga 91
|||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 128 gcctggaaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgtggg 69
Query: 92 ttactgtagcacttatggctaatcatggactaattagacacaaaagattcgtctcgcgat 151
||| |||||||||||||| ||||||| ||||||||| | ||||||||||||||| |||
Sbjct: 68 ttattgtagcacttatggttaatcatatactaattaggctcaaaagattcgtctcatgat 9
Query: 152 ttcc 155
||||
Sbjct: 8 ttcc 5
Score = 46.1 bits (23), Expect = 1e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 109 gctaatcatggactaattagacacaaaagattcgtctcgcgatttcc 155
|||||| | ||| ||||||| | |||||||||||||||||| |||||
Sbjct: 78 gctaataacggattaattaggctcaaaagattcgtctcgcggtttcc 124
>51304_osa-miRf12089-akr:pmrd
Length = 120
Score = 139 bits (70), Expect = 9e-34
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 46 agacgaattttttgagtctaattaatccgccattagcacatgtggattactgtagcactt 105
|||||||| ||||||| ||||||||| || ||||||||||||||| || || ||||||||
Sbjct: 11 agacgaatcttttgagcctaattaattcgtcattagcacatgtgggttgctatagcactt 70
Query: 106 atggctaatcatggactaattagacacaaaagattcgtctcgcgatttcc 155
||||| |||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 71 atggcaaatcatgggctaattagactcaaaagattcgtctcgcgatttcc 120
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 36 ggaaaccgcgagacgaattttttgagtctaatta 69
||||| |||||||||||| |||||||||||||||
Sbjct: 120 ggaaatcgcgagacgaatcttttgagtctaatta 87
>51249_osa-miRf12034-akr:pmrd
Length = 121
Score = 131 bits (66), Expect = 2e-31
Identities = 105/118 (88%)
Strand = Plus / Minus
Query: 36 ggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtggattac 95
||||||||||||| |||| | ||||| |||||||||||| ||||||||||| || ||||
Sbjct: 121 ggaaaccgcgagatgaatctcttgagcctaattaatccgtcattagcacatacgggttac 62
Query: 96 tgtagcacttatggctaatcatggactaattagacacaaaagattcgtctcgcgattt 153
|||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||
Sbjct: 61 tgtagcacttataactaatcatggactaattaggctcaaaagattcgtcttgcgattt 4
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 127 bits (64), Expect = 3e-30
Identities = 100/112 (89%)
Strand = Plus / Plus
Query: 36 ggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtggattac 95
|||||||||||||||||| ||||||| |||||||| ||| |||||| |||||||| ||||
Sbjct: 2 ggaaaccgcgagacgaatcttttgagcctaattaagccgtcattagtacatgtgggttac 61
Query: 96 tgtagcacttatggctaatcatggactaattagacacaaaagattcgtctcg 147
||||||| |||||| |||||| |||||||||| | ||||||||||||||||
Sbjct: 62 tgtagcatttatggttaatcacagactaattaggctcaaaagattcgtctcg 113
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 122 taattagacacaaaagattcgtctcgcgatttcc 155
||||||| | |||||||||||||||||| |||||
Sbjct: 35 taattaggctcaaaagattcgtctcgcggtttcc 2
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 127 bits (64), Expect = 3e-30
Identities = 106/120 (88%)
Strand = Plus / Minus
Query: 36 ggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtggattac 95
|||||||||||||||||| ||||||| |||||||||| |||||| | || ||| ||||
Sbjct: 120 ggaaaccgcgagacgaatcttttgagcataattaatccatcattagtatatttgggttac 61
Query: 96 tgtagcacttatggctaatcatggactaattagacacaaaagattcgtctcgcgatttcc 155
| ||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 60 tatagcatttatggctaatcatggactaattaggctcaaaagatttgtctcgcgatttcc 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 110 ctaatcatggactaattagacacaaaagattcgtctcgcgatttcc 155
||||| ||||| |||||| | |||||||||||||||||| |||||
Sbjct: 75 ctaatgatggattaattatgctcaaaagattcgtctcgcggtttcc 120
>50516_osa-miRf11301-akr:pmrd
Length = 139
Score = 109 bits (55), Expect = 8e-25
Identities = 82/91 (90%)
Strand = Plus / Plus
Query: 83 acatgtggattactgtagcacttatggctaatcatggactaattagacacaaaagattcg 142
|||||||| |||||||||||||||||| ||||||| |||||||||| | |||||||||||
Sbjct: 4 acatgtgggttactgtagcacttatggttaatcatagactaattaggctcaaaagattcg 63
Query: 143 tctcgcgatttcctctctaactgtgcaatta 173
||||||||||||| | |||||||||||||
Sbjct: 64 tctcgcgatttccatgcaaactgtgcaatta 94
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 35 tggaaaccgcgagacgaattttttgagtctaatta 69
|||||| |||||||||||| ||||||| |||||||
Sbjct: 77 tggaaatcgcgagacgaatcttttgagcctaatta 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 80 agcacatgtggattactgtagcacttatggctaatca 116
||||||||||| ||||| |||||| ||||| ||||||
Sbjct: 139 agcacatgtgggttactatagcacctatggttaatca 103
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 84 catgtggattactgtagcacttatggctaatcatggactaattagacacaaaagattcgt 143
||||||| || || ||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 66 catgtgggttgctatagcacttatggctaatcatggactaattagactcaaaagatttgt 7
Query: 144 ctcg 147
||||
Sbjct: 6 ctcg 3
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 60.0 bits (30), Expect = 6e-10
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 31 cgcctggaaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgt 88
|||||| |||||||||||||||||| || || ||||||||||| |||||||| ||||
Sbjct: 136 cgcctgtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgt 79
>49015_osa-miR445h:pmrd
Length = 277
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 110 ctaatcatggactaattagacacaaaagattcgtctcgcga 150
|||||||||| ||||||||| |||||||||||||||||||
Sbjct: 144 ctaatcatggtgtaattagactcaaaagattcgtctcgcga 184
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 42 cgcgagacgaattttttgagtctaatta 69
|||||||||||| |||||||||||||||
Sbjct: 183 cgcgagacgaatcttttgagtctaatta 156
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 gcgagacgaattttttgagtctaattaatcc 73
|||||||||||||||| || |||||||||||
Sbjct: 95 gcgagacgaattttttaagcctaattaatcc 125
>49013_osa-miR445f:pmrd
Length = 305
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 110 ctaatcatggactaattagacacaaaagattcgtctcgcga 150
|||||||||| ||||||||| |||||||||||||||||||
Sbjct: 159 ctaatcatggtgtaattagactcaaaagattcgtctcgcga 199
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 42 cgcgagacgaattttttgagtctaatta 69
|||||||||||| |||||||||||||||
Sbjct: 198 cgcgagacgaatcttttgagtctaatta 171
>49012_osa-miR445e:pmrd
Length = 265
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 110 ctaatcatggactaattagacacaaaagattcgtctcgcga 150
|||||||||| ||||||||| |||||||||||||||||||
Sbjct: 138 ctaatcatggtgtaattagactcaaaagattcgtctcgcga 178
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 42 cgcgagacgaattttttgagtctaatta 69
|||||||||||| |||||||||||||||
Sbjct: 177 cgcgagacgaatcttttgagtctaatta 150
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 gcgagacgaattttttgagtctaattaatcc 73
|||||||||||||||| || |||||||||||
Sbjct: 89 gcgagacgaattttttaagcctaattaatcc 119
>49009_osa-miR445b:pmrd
Length = 264
Score = 58.0 bits (29), Expect = 3e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 110 ctaatcatggactaattagacacaaaagattcgtctcgcga 150
|||||||||| ||||||||| |||||||||||||||||||
Sbjct: 137 ctaatcatggtgtaattagactcaaaagattcgtctcgcga 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 42 cgcgagacgaattttttgagtctaatta 69
|||||||||||| |||||||||||||||
Sbjct: 176 cgcgagacgaatcttttgagtctaatta 149
>49004_osa-miR442:pmrd
Length = 233
Score = 56.0 bits (28), Expect = 1e-08
Identities = 57/66 (86%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 38 aaaccgcgagacgaattttttgagtctaattaatccgccattagcacatgtggattactg 97
|||| ||||||||||||| || || |||||||||||| |||||||| |||| ||||||
Sbjct: 174 aaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgt---ttactg 118
Query: 98 tagcac 103
||||||
Sbjct: 117 tagcac 112
>49008_osa-miR445a:pmrd
Length = 268
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 112 aatcatggactaattagacacaaaagattcgtctcgcga 150
|||||||| ||||||||| |||||||||||||||||||
Sbjct: 150 aatcatggtgtaattagactcaaaagattcgtctcgcga 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 42 cgcgagacgaattttttgagtctaatta 69
|||||||||||| |||||||||||||||
Sbjct: 187 cgcgagacgaatcttttgagtctaatta 160
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 gcgagacgaattttttgagtctaattaatcc 73
|||||||||||||||| || |||||||||||
Sbjct: 82 gcgagacgaattttttaagcctaattaatcc 112
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 133 aaaagattcgtctcgcgatttcctctctaactg 165
|||||||||||||||||||||||| || |||||
Sbjct: 34 aaaagattcgtctcgcgatttcctgtcaaactg 2
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 gcgagacgaattttttgagtctaattaatcc 73
|||||||||||||||| || |||||||||||
Sbjct: 94 gcgagacgaattttttaagcctaattaatcc 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 110 ctaatcatggactaattagacacaaaagattcgtctcgcga 150
|||||||||| |||||| || |||||||||||||| ||||
Sbjct: 143 ctaatcatggtgtaattaaactcaaaagattcgtcttgcga 183
>49010_osa-miR445c:pmrd
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 gcgagacgaattttttgagtctaattaatcc 73
|||||||||||||||| || |||||||||||
Sbjct: 87 gcgagacgaattttttaagcctaattaatcc 117
