miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48593_gma-miR1510b:pmrd
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 5 tttatggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagtta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttatggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagtta 60
Query: 65 gttgttgttttacctattccaccaattccatcta 98
||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgttgttttacctattccaccaattccatcta 94
>48592_gma-miR1510a:pmrd
Length = 93
Score = 131 bits (66), Expect = 1e-31
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 6 ttatggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttag 65
|||||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||
Sbjct: 1 ttatggaactggagggataggtaaaacaatgactgctgtataagtaattgttatagttag 60
Query: 66 ttgttgttttacctattccaccaattccat 95
|||||||||||||||||||||| |||||||
Sbjct: 61 ttgttgttttacctattccacccattccat 90
>48777_mtr-miR2089:pmrd
Length = 163
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 ttttacctattccaccaattccat 95
||||||||||||||||||||||||
Sbjct: 39 ttttacctattccaccaattccat 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 67 tgttgttttacctattccaccaat 90
|||||||||||||||| |||||||
Sbjct: 130 tgttgttttacctattacaccaat 107
>48776_mtr-miR2089:pmrd
Length = 163
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 ttttacctattccaccaattccat 95
||||||||||||||||||||||||
Sbjct: 39 ttttacctattccaccaattccat 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 67 tgttgttttacctattccaccaat 90
|||||||||||||||| |||||||
Sbjct: 130 tgttgttttacctattacaccaat 107
